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nucleocapsid_protein
Euk-VirROUT_virus
nucleocapsid_protein__YP_009019195__ROUT_virus__1303019
Identity
- Accession:
- YP_009019195 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
73.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Hareavirales›
Arenaviridae›
Reptarenavirus›
ROUT_virus
TaxID: 1303019
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 399-581
Domain cluster:
rep: nucleoprotein__YP_010086252__Dante_Muikkunen_virus_1__2447916__D386-583
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17290.9 best | Arena_ncap_C | 119.0 | 2.20e-34 | 95.1% | 88.4% |
D2
medium
residues 169-180_232-345
Domain cluster:
rep: nucleoprotein__YP_006590087__CAS_virus__1223561__D1-21_80-113_255-329
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00843.23 best | Arena_nucleocap | 58.8 | 6.30e-16 | 84.9% | 29.3% |