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nucleocapsid_protein
Euk-VirVesicular_stomatitis_New_Jersey_virus
nucleocapsid_protein__YP_009047081__Vesicular_stomatitis_New_Jersey_virus__11280
Identity
- Accession:
- YP_009047081 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
91.8
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Vesiculovirus›
Vesicular_stomatitis_New_Jersey_virus
TaxID: 11280
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-220
Domain cluster:
rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 225.6 | 1.50e-66 | 100.0% | 44.6% |
D2
high
residues 226-342_367-421
Domain cluster:
rep: nucleoprotein__YP_009094365__Almpiwar_virus__318843__D225-426
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 173.0 | 1.40e-50 | 69.8% | 28.8% |