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nucleocapsid_protein
Euk-VirTench_rhabdovirus
nucleocapsid_protein__YP_009094202__Tench_rhabdovirus__1288358
Identity
- Accession:
- YP_009094202 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
89.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Sprivivirus›
Tench_rhabdovirus
TaxID: 1288358
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-217
Domain cluster:
rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 185.5 | 2.30e-54 | 100.0% | 43.9% |
D2
high
residues 222-339_361-417
Domain cluster:
rep: nucleocapsid_protein__YP_009551688__Merida-like_virus_KE-2017a__1969830__D268-379
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 162.2 | 2.70e-47 | 70.3% | 28.5% |