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nucleocapsid_protein
Euk-VirSalem_virus
nucleocapsid_protein__YP_009094332__Salem_virus__120499
Identity
- Accession:
- YP_009094332 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
70.5
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Salemvirus›
Salem_virus
TaxID: 120499
Cluster
View cluster (62 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 264-399
Domain cluster:
rep: nucleocapsid_protein__NP_054707__Mumps_orthorubulavirus__2560602__D281-403
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 227.7 | 3.40e-67 | 100.0% | 33.2% |
D2
medium
residues 32-145_216-240
Domain cluster:
rep: N_protein__YP_087120__Rinderpest_virus_-strain_Kabete_O-__11242__D32-156_211-243
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 94.4 | 1.00e-26 | 85.6% | 29.0% |
D3
medium
residues 146-215_241-263
Domain cluster:
rep: nucleocapsid_protein__YP_009512957__Feline_morbillivirus__1170234__D152-264
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 87.9 | 9.60e-25 | 77.4% | 17.0% |