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nucleocapsid_protein
Euk-VirCamel_alphacoronavirus
nucleocapsid_protein__YP_009194643__Camel_alphacoronavirus__1699095
Identity
- Accession:
- YP_009194643 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
69.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Alphacoronavirus›
Camel_alphacoronavirus
TaxID: 1699095
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-139
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 145.4 | 3.40e-42 | 100.0% | 32.9% |
D2
high
residues 235-332
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 129.4 | 2.50e-37 | 100.0% | 27.6% |