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nucleocapsid_protein
Euk-VirBtMr-AlphaCoV_SAX2011
nucleocapsid_protein__YP_009199613__BtMr-AlphaCoV_SAX2011__1503289
Identity
- Accession:
- YP_009199613 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
66.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Alphacoronavirus›
BtMr-AlphaCoV/SAX2011
TaxID: 1503289
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-135
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 161.4 | 4.70e-47 | 100.0% | 33.7% |
D2
high
residues 271-358
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 116.8 | 1.70e-33 | 100.0% | 25.6% |