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nucleocapsid_protein
Euk-VirBtRf-AlphaCoV_HuB2013
nucleocapsid_protein__YP_009199794__BtRf-AlphaCoV_HuB2013__1503292
Identity
- Accession:
- YP_009199794 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Alphacoronavirus›
BtRf-AlphaCoV/HuB2013
TaxID: 1503292
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-137
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 160.6 | 8.10e-47 | 100.0% | 33.4% |
D2
medium
residues 243-343
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 134.5 | 7.10e-39 | 100.0% | 29.1% |