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nucleocapsid_protein
Euk-VirBtNv-AlphaCoV_SC2013
nucleocapsid_protein__YP_009201734__BtNv-AlphaCoV_SC2013__1503291
Identity
- Accession:
- YP_009201734 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
66.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Alphacoronavirus›
BtNv-AlphaCoV/SC2013
TaxID: 1503291
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-141
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 157.2 | 8.90e-46 | 100.0% | 33.1% |
D2
medium
residues 276-371
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 120.9 | 9.80e-35 | 100.0% | 27.0% |