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nucleocapsid_protein
Euk-VirAvian_paramyxovirus_goose_Shimane_67_2000
nucleocapsid_protein__YP_009255221__Avian_paramyxovirus_goose_Shimane_67_2000__1401445
Identity
- Accession:
- YP_009255221 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
74.3
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Orthoavulavirus›
avian_paramyxovirus_13
TaxID: 1401445
Cluster
View cluster (62 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-142
Domain cluster:
rep: nucleocapsid_protein__YP_009177597__Phocine_morbillivirus__11240__D32-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 92.4 | 4.20e-26 | 100.0% | 27.5% |
D2
medium
residues 284-400
Domain cluster:
rep: nucleocapsid_protein__NP_054707__Mumps_orthorubulavirus__2560602__D281-403
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 154.8 | 4.80e-45 | 100.0% | 29.0% |