←Back to structures
nucleocapsid_protein
Euk-VirSanxia_Water_Strider_Virus_1
nucleocapsid_protein__YP_009293596__Sanxia_Water_Strider_Virus_1__1608060
Identity
- Accession:
- YP_009293596 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
59.5
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Hareavirales›
Nairoviridae›
Striwavirus›
Sanxia_Water_Strider_Virus_1
TaxID: 1608060
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 193-292
D2
medium
residues 19-76_420-465
D3
medium
residues 77-191_312-419_466-485
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5f42A02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.60 | 22.0 | 3.71e-01 | 85.2% | 96.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1723600 | 3574.1.1.1 ↗ | alpha complex topology › Nucleocapsid protein › Nucleocapsid protein › Nucleocapsid protein › Nairo_nucleo | 0.84 | 81.0 | 6.26e-01 | 100.0% | 83.9% |
| 4890819 | 3574.1.1.1 ↗ | alpha complex topology › Nucleocapsid protein › Nucleocapsid protein › Nucleocapsid protein › Nairo_nucleo | 0.83 | 79.0 | 6.14e-01 | 98.4% | 85.3% |