←Back to structures
nucleocapsid_protein
Euk-VirCoronavirus_AcCoV-JC34
nucleocapsid_protein__YP_009380526__Coronavirus_AcCoV-JC34__1964806
Identity
- Accession:
- YP_009380526 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
68.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Alphacoronavirus›
Coronavirus_AcCoV-JC34
TaxID: 1964806
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-157
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 131.3 | 6.70e-38 | 100.0% | 33.4% |
D2
high
residues 246-353
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 109.2 | 3.40e-31 | 100.0% | 30.5% |