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nucleocapsid_protein
Euk-VirAvian_metaavulavirus_2
nucleocapsid_protein__YP_009513213__Avian_metaavulavirus_2__2560313
Identity
- Accession:
- YP_009513213 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
78.5
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Metaavulavirus›
avian_paramyxovirus_2
TaxID: 2560313
Cluster
View cluster (62 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 33-139
Domain cluster:
rep: nucleocapsid_protein__YP_009177597__Phocine_morbillivirus__11240__D32-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 83.2 | 2.60e-23 | 100.0% | 25.8% |
D2
medium
residues 140-254
Domain cluster:
rep: nucleocapsid_protein__YP_009512957__Feline_morbillivirus__1170234__D152-264
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 109.2 | 3.30e-31 | 100.0% | 28.5% |
D3
medium
residues 255-403
Domain cluster:
rep: nucleocapsid_protein__NP_054707__Mumps_orthorubulavirus__2560602__D281-403
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 208.7 | 2.10e-61 | 99.3% | 36.0% |