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nucleocapsid_protein
Euk-VirAlstroemeria_yellow_spot_virus
nucleocapsid_protein__YP_009553291__Alstroemeria_yellow_spot_virus__2212644
Identity
- Accession:
- YP_009553291 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
74.2
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Elliovirales›
Tospoviridae›
Orthotospovirus›
Alstroemeria_yellow_spot_virus
TaxID: 2212644
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-160
Domain cluster:
rep: N__YP_009259256__Tospovirus_kiwifruit_YXW_2014__1857323__D7-21_34-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01533.23 best | Tospo_nucleocap | 147.0 | 9.00e-43 | 100.0% | 62.5% |
D2
medium
residues 161-232
Domain cluster:
rep: nucleocapsid_protein__YP_717923__Capsicum_chlorosis_virus__163325__D169-226
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01533.23 best | Tospo_nucleocap | 74.1 | 1.60e-20 | 100.0% | 26.9% |