nucleocapsid_protein

Euk-Vir

Apore_mammarenavirus

nucleocapsid_protein__YP_009553322__Apore_mammarenavirus__2059312

Identity

78.4 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Hareavirales› Arenaviridae› Mammarenavirus› Apore_virus

TaxID: 2059312

View cluster (26 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 359-552

PDB

Domain cluster: rep: nucleoprotein__YP_010086252__Dante_Muikkunen_virus_1__2447916__D386-583

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17290.9 best	Arena_ncap_C	281.1	3.90e-84	92.3%	96.1%

D2 medium residues 7-26_83-119_257-336

PDB

Domain cluster: rep: nucleoprotein__YP_006590087__CAS_virus__1223561__D1-21_80-113_255-329

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00843.23 best	Arena_nucleocap	142.0	3.10e-41	59.1%	23.4%
PF00843.23	Arena_nucleocap	36.5	3.90e-09	29.2%	11.1%

D3 medium residues 27-82_166-256

PDB

Domain cluster: rep: nucleoprotein__YP_006858707__Lunk_virus_NKS-1__1134579__D27-82_171-257

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00843.23 best	Arena_nucleocap	153.9	7.40e-45	63.3%	27.5%
PF00843.23	Arena_nucleocap	72.0	6.00e-20	39.5%	17.1%