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nucleocapsid_protein
Euk-VirHuman_coronavirus_OC43
nucleocapsid_protein__YP_009555245__Human_coronavirus_OC43__31631
Identity
- Accession:
- YP_009555245 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
63.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Human_coronavirus_OC43
TaxID: 31631
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 61-189
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 130.4 | 1.30e-37 | 99.2% | 35.8% |
D2
medium
residues 255-318_357-385
Domain cluster:
rep: nucleocapsid_protein__NP_045302__Murine_hepatitis_virus__11138__D254-319_356-380
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 68.1 | 1.10e-18 | 78.5% | 18.3% |