←Back to structures
nucleocapsid_protein
Euk-VirAsikkala_orthohantavirus
nucleocapsid_protein__YP_009664722__Asikkala_orthohantavirus__1980458
Identity
- Accession:
- YP_009664722 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
80.9
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Elliovirales›
Hantaviridae›
Orthohantavirus›
Orthohantavirus_asikkalaense
TaxID: 1980458
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-60
Domain cluster:
rep: nucleocapsid_protein__YP_009362056__Cao_Bang_orthohantavirus__1980464__D1-71
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00846.25 best | Hanta_nucleocap | 60.4 | 2.10e-16 | 100.0% | 14.1% |
D2
high
residues 234-423
Domain cluster:
rep: hypothetical_protein__NP_941977__Hantaan_orthohantavirus__1980471__D201-423
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00846.25 best | Hanta_nucleocap | 346.8 | 2.60e-103 | 100.0% | 44.0% |
D3
medium
residues 117-233
Domain cluster:
rep: nucleocapsid_protein__YP_001911121__Thottopalayam_virus__1980493__D127-224
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00846.25 best | Hanta_nucleocap | 223.5 | 6.90e-66 | 100.0% | 27.4% |