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nucleocapsid_protein
Euk-VirShrew_coronavirus
nucleocapsid_protein__YP_009755842__Shrew_coronavirus__2050019
Identity
- Accession:
- YP_009755842 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
65.3
mean pLDDT
Taxonomy
TaxID: 2050019
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-155
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 114.2 | 1.10e-32 | 100.0% | 30.8% |
D2
high
residues 257-347
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 74.0 | 1.80e-20 | 100.0% | 25.9% |