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nucleocapsid_protein
Euk-VirCanada_goose_coronavirus
nucleocapsid_protein__YP_009755908__Canada_goose_coronavirus__2569586
Identity
- Accession:
- YP_009755908 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
66.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Gammacoronavirus›
Canada_goose_coronavirus
TaxID: 2569586
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-160
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 123.1 | 2.00e-35 | 100.0% | 30.2% |
D2
high
residues 228-332
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 87.7 | 1.20e-24 | 99.1% | 27.6% |