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nucleocapsid_protein
Euk-VirMurine_hepatitis_virus
nucleocapsid_protein__YP_009824987__Murine_hepatitis_virus__11138
Identity
- Accession:
- YP_009824987 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
63.7
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Murine_hepatitis_virus
TaxID: 11138
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 254-319_356-380
Domain cluster:
rep: nucleocapsid_protein__NP_045302__Murine_hepatitis_virus__11138__D254-319_356-380
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 72.5 | 4.90e-20 | 78.0% | 18.9% |
D2
medium
residues 65-192
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 142.5 | 2.70e-41 | 100.0% | 35.8% |