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nucleocapsid_protein
Euk-VirBirds-foot_trefoil_nucleorhabdovirus
nucleocapsid_protein__YP_009825045__Birds-foot_trefoil_nucleorhabdovirus__2283315
Identity
- Accession:
- YP_009825045 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
70.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Bird's-foot_trefoil_nucleorhabdovirus
TaxID: 2283315
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-118_151-253
Domain cluster:
rep: N_protein__YP_010086409__Maize_yellow_striate_virus__1168550__D39-103_154-262
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 39.2 | 7.80e-10 | 98.4% | 35.4% |
D2
high
residues 262-393
Domain cluster:
rep: nucleocapsid_protein__YP_010087150__Cytorhabdovirus_caricae__2364291__D277-416_434-447
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 46.5 | 4.50e-12 | 65.9% | 29.5% |