←Back to structures
nucleocapsid_protein
Euk-VirPhysostegia_chlorotic_mottle_virus
nucleocapsid_protein__YP_010086596__Physostegia_chlorotic_mottle_virus__1905830
Identity
- Accession:
- YP_010086596 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
73.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Alphanucleorhabdovirus›
Physostegia_chlorotic_mottle_virus
TaxID: 1905830
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-124_152-257
Domain cluster:
rep: N_protein__YP_010086409__Maize_yellow_striate_virus__1168550__D39-103_154-262
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 41.2 | 1.90e-10 | 99.5% | 64.3% |
D2
high
residues 261-410
Domain cluster:
rep: nucleocapsid__YP_009289348__Sanxia_Water_Strider_Virus_5__1608064__D276-411
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 53.4 | 3.60e-14 | 58.0% | 30.2% |