nucleoprotein,_partial

Euk-Vir

Cuiaba_virus

nucleoprotein,_partial__YP_010087176__Cuiaba_virus__2495751

Identity

79.3 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Sripuvirus› Cuiaba_virus

TaxID: 2495751

View cluster (144 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 63-244

PDB

Domain cluster: rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00945.24 best	Rhabdo_ncap	93.0	2.70e-26	100.0%	41.2%

D2 high residues 254-370_396-446

PDB

Domain cluster: rep: nucleoprotein__YP_009094365__Almpiwar_virus__318843__D225-426

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00945.24 best	Rhabdo_ncap	85.4	5.50e-24	72.0%	28.1%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2gicD02	1.10.3610.10	Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein	0.95	93.0	8.70e-01	100.0%	96.4%
2gttJ02	1.10.3610.10	Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein	0.89	86.0	8.21e-01	100.0%	96.3%
1n93X02	1.10.3050.10	Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 2 › borna disease virus nucleoprotein, domain 2	0.68	42.0	4.76e-01	74.4%	81.1%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2966640	566.2.1.1 ↗	alpha complex topology › P40 nucleoprotein-like › Rhabdovirus nucleocapsid protein › Rhabdovirus nucleocapsid protein › Rhabdo_ncap	0.95	92.0	6.64e-01	100.0%	44.0%
2992377	566.2.1.1 ↗	alpha complex topology › P40 nucleoprotein-like › Rhabdovirus nucleocapsid protein › Rhabdovirus nucleocapsid protein › Rhabdo_ncap	0.94	65.0	4.80e-01	72.6%	32.0%