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nucleoprotein_N
Euk-VirLyssavirus_rabies
nucleoprotein_N__NP_056793__Lyssavirus_rabies__11292
Identity
- Accession:
- NP_056793 ↗
- Protein ID:
- nucleoprotein_N
- Kingdom:
- euk
Quality
72.9
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Lyssavirus›
Lyssavirus_rabies
TaxID: 11292
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-231
Domain cluster:
rep: nucleoprotein__YP_010084457__Lepeophtheirus_salmonis_rhabdovirus_127__1573761__D41-226
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 242.1 | 1.50e-71 | 100.0% | 44.4% |
D2
medium
residues 253-450
Domain cluster:
rep: nucleoprotein__YP_009094365__Almpiwar_virus__318843__D225-426
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 242.7 | 9.50e-72 | 89.4% | 42.7% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gttJ02 | 1.10.3610.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein | 0.86 | 73.0 | 7.49e-01 | 98.5% | 89.5% |
| 2gicD02 | 1.10.3610.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein | 0.81 | 70.0 | 7.09e-01 | 98.5% | 89.7% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 28.0 | 3.37e-01 | 86.9% | 78.8% |