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nucleoprotein
Euk-VirGolden_Gate_virus
nucleoprotein__YP_006590091__Golden_Gate_virus__1223562
Identity
- Accession:
- YP_006590091 ↗
- Protein ID:
- nucleoprotein
- Kingdom:
- euk
Quality
70.0
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Hareavirales›
Arenaviridae›
Reptarenavirus›
Golden_Gate_virus
TaxID: 1223562
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 405-588
Domain cluster:
rep: nucleoprotein__YP_010086252__Dante_Muikkunen_virus_1__2447916__D386-583
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17290.9 best | Arena_ncap_C | 127.1 | 6.90e-37 | 94.0% | 87.8% |
D2
medium
residues 1-83
Domain cluster:
rep: nucleoprotein__YP_009019205__University_of_Helsinki_virus__1382279__D13-88
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00843.23 best | Arena_nucleocap | 39.9 | 3.50e-10 | 94.0% | 20.4% |
D3
medium
residues 172-268_318-339
Domain cluster:
rep: nucleoprotein__YP_006590087__CAS_virus__1223561__D166-254
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00843.23 best | Arena_nucleocap | 45.9 | 5.30e-12 | 84.0% | 26.1% |