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nucleoprotein
Euk-VirWalkabout_Creek_virus
nucleoprotein__YP_009176978__Walkabout_Creek_virus__1569258
Identity
- Accession:
- YP_009176978 ↗
- Protein ID:
- nucleoprotein
- Kingdom:
- euk
Quality
87.3
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Sunrhavirus›
Walkabout_Creek_virus
TaxID: 1569258
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-219
Domain cluster:
rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 130.9 | 8.40e-38 | 98.4% | 42.4% |
D2
high
residues 225-424
Domain cluster:
rep: nucleoprotein__YP_009094365__Almpiwar_virus__318843__D225-426
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 87.6 | 1.20e-24 | 92.0% | 46.1% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gicD02 | 1.10.3610.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein | 0.91 | 85.0 | 8.62e-01 | 100.0% | 97.9% |
| 2gttJ02 | 1.10.3610.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein | 0.87 | 78.0 | 8.08e-01 | 100.0% | 97.9% |