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nucleoprotein

Euk-Vir

Oz_virus

nucleoprotein__YP_009553282__Oz_virus__2137161

Identity

Accession:
YP_009553282 ↗
Protein ID:
nucleoprotein
Kingdom:
euk

Quality

48.1 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Insthoviricetes› Articulavirales› Orthomyxoviridae› Thogotovirus› Oz_virus

TaxID: 2137161

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-135
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fs0G01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.70 32.0 2.97e-01 99.0% 33.1%
4jneA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.60 45.0 4.88e-01 80.0% 97.7%
4am6A02 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.60 43.0 3.86e-01 76.2% 54.2%
2vixA03 1.20.1280.240 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.59 46.0 4.53e-01 86.7% 78.8%
2db7A01 6.10.250.980 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.58 30.0 4.03e-01 82.9% 100.0%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.55 36.0 3.15e-01 93.3% 43.4%
5awwY00 1.10.3370.10 Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain 0.55 48.0 3.27e-01 100.0% 45.0%
1s62A00 3.30.1150.10 Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › 0.55 43.0 4.44e-01 98.1% 88.2%
3dbgA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.54 43.0 3.03e-01 90.5% 72.6%
4n4nB00 3.90.640.100 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.53 30.0 3.68e-01 83.8% 100.0%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 47.0 4.33e-01 98.1% 98.5%
2r6fA04 1.10.8.280 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ABC transporter ATPase domain-like 0.52 36.0 3.49e-01 70.5% 68.6%
6j95A01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 45.0 3.04e-01 97.1% 72.2%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 27.0 3.33e-01 82.9% 81.2%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.55e-01 100.0% 63.0%
1xttB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 44.0 3.62e-01 97.1% 88.9%
1x7vA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 36.0 3.70e-01 100.0% 77.6%
1pu1A00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.51 38.0 4.08e-01 87.6% 93.4%
1vt0k00 1.10.3230.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) 0.50 37.0 3.32e-01 76.2% 75.2%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3289306 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.63 55.0 4.42e-01 94.3% 87.5%
4833097 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.61 48.0 4.61e-01 84.8% 86.1%
1872685 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.60 53.0 3.67e-01 100.0% 81.5%
4199985 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.59 52.0 3.81e-01 100.0% 82.6%
1117759 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.59 52.0 3.99e-01 100.0% 78.3%
3169442 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.59 52.0 3.26e-01 100.0% 58.0%
3333193 102.3.1.1 ↗ alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha 0.58 44.0 4.38e-01 81.9% 98.2%
3800293 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 38.0 4.05e-01 88.6% 81.7%
4809699 3781.1.1.1 ↗ a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain › Ribosomal_L11_N 0.54 24.0 2.96e-01 87.6% 63.1%
3883105 3226.1.1.1 ↗ alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease 0.53 48.0 3.09e-01 100.0% 72.8%
3225873 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.53 43.0 3.00e-01 88.6% 73.0%
4044429 1197.1.1.1 ↗ alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf 0.52 44.0 3.53e-01 97.1% 83.5%
3731446 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.52 42.0 3.55e-01 90.5% 82.7%
3271085 2004.1.1.17 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.50 44.0 2.70e-01 100.0% 66.2%
D2 medium residues 177-284
PDB
D3 medium residues 285-343
PDB
D4 medium residues 344-371_383-463
PDB