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nucleoprotein
Euk-VirAvian_metaavulavirus_20
nucleoprotein__YP_009553488__Avian_metaavulavirus_20__2560314
Identity
- Accession:
- YP_009553488 ↗
- Protein ID:
- nucleoprotein
- Kingdom:
- euk
Quality
78.0
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Metaavulavirus›
avian_paramyxovirus_20
TaxID: 2560314
Cluster
View cluster (62 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 272-400
Domain cluster:
rep: nucleocapsid_protein__NP_054707__Mumps_orthorubulavirus__2560602__D281-403
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 178.3 | 3.40e-52 | 100.0% | 32.0% |
D2
medium
residues 33-158
Domain cluster:
rep: nucleocapsid_protein__YP_009177597__Phocine_morbillivirus__11240__D32-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 89.1 | 4.20e-25 | 99.2% | 29.5% |
D3
medium
residues 159-271
Domain cluster:
rep: nucleocapsid_protein__YP_009512957__Feline_morbillivirus__1170234__D152-264
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 121.7 | 5.50e-35 | 100.0% | 27.8% |