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nucleoprotein
Euk-VirGarba_virus
nucleoprotein__YP_010087296__Garba_virus__864696
Identity
- Accession:
- YP_010087296 ↗
- Protein ID:
- nucleoprotein
- Kingdom:
- euk
Quality
87.4
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Sunrhavirus›
Garba_virus
TaxID: 864696
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-215
Domain cluster:
rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 122.6 | 2.80e-35 | 100.0% | 44.9% |
D2
high
residues 220-341_355-416
Domain cluster:
rep: nucleocapsid_protein__YP_009551688__Merida-like_virus_KE-2017a__1969830__D268-379
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 71.3 | 1.10e-19 | 87.5% | 28.1% |