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occlusion-derived_virus_envelope_protein
Euk-VirCondylorrhiza_vestigialis_MNPV
occlusion-derived_virus_envelope_protein__YP_009118539__Condylorrhiza_vestigialis_MNPV__1592576
Identity
- Accession:
- YP_009118539 ↗
- Protein ID:
- occlusion-derived_virus_envelope_protein
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Condylorrhiza_vestigialis_mutiple_nucleopolyhedrovirus
TaxID: 1592576
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 81-146
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05274.17 best | Baculo_E25 | 85.1 | 8.00e-24 | 100.0% | 34.2% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 47.0 | 2.85e-01 | 74.2% | 97.3% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.67 | 47.0 | 4.26e-01 | 74.2% | 83.3% |
| 4lxqB00 | 3.40.50.12230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 39.0 | 2.55e-01 | 75.8% | 13.9% |
| 1dl5A02 | 3.55.20.10 | Alpha Beta › 3-Layer(bab) Sandwich › Protein-l-isoaspartate O-methyltransferase; Chain: A, domain 2 › Protein-L-isoaspartyl O-methyltransferase, C-terminal domain | 0.64 | 46.0 | 3.74e-01 | 74.2% | 46.6% |
| 1y4oA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.64 | 45.0 | 3.94e-01 | 75.8% | 76.9% |
| 5llwA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 43.0 | 3.88e-01 | 71.2% | 96.7% |
| 2z1pA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 53.0 | 4.18e-01 | 98.5% | 54.7% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 32.0 | 3.68e-01 | 71.2% | 72.3% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.59 | 42.0 | 4.46e-01 | 87.9% | 87.5% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.59 | 41.0 | 4.15e-01 | 72.7% | 100.0% |
| 2mh4A00 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 47.0 | 4.28e-01 | 98.5% | 65.2% |
| 2yx1A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 51.0 | 3.73e-01 | 100.0% | 39.4% |
| 4b60A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 48.0 | 3.86e-01 | 98.5% | 58.7% |
| 2l04A00 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 42.0 | 3.88e-01 | 98.5% | 60.4% |
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 39.0 | 2.76e-01 | 72.7% | 93.4% |
| 3pnrB00 | 2.60.40.2020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 48.0 | 3.92e-01 | 100.0% | 73.6% |
| 2cpqA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 39.0 | 3.96e-01 | 74.2% | 79.7% |
| 2oqbA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 40.0 | 3.37e-01 | 75.8% | 73.1% |
| 3afcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 48.0 | 2.92e-01 | 100.0% | 95.0% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 47.0 | 3.06e-01 | 98.5% | 90.9% |
| 3rkgA01 | 2.40.128.330 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 38.0 | 3.40e-01 | 74.2% | 83.0% |
| 1egxA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 39.0 | 3.21e-01 | 75.8% | 77.4% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.54 | 45.0 | 3.16e-01 | 93.9% | 74.8% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 46.0 | 2.98e-01 | 100.0% | 95.7% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 2.80e-01 | 100.0% | 96.2% |
| 4khbD02 | 2.30.29.220 | Mainly Beta › Roll › PH-domain like › Structure-specific recognition protein (SSRP1) | 0.53 | 31.0 | 2.95e-01 | 100.0% | 46.9% |
| 3fmwC02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 37.0 | 3.55e-01 | 74.2% | 100.0% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 38.0 | 2.99e-01 | 75.8% | 62.7% |
| 5k19A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 2.90e-01 | 100.0% | 93.4% |
| 2ktsA01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 36.0 | 3.14e-01 | 72.7% | 98.0% |
| 3frnA01 | 3.10.129.70 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.52 | 39.0 | 3.09e-01 | 80.3% | 66.9% |
| 4wiqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.60e-01 | 98.5% | 54.7% |
| 3ndzE00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 45.0 | 3.86e-01 | 98.5% | 59.8% |
| 1cvrA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.55e-01 | 98.5% | 63.9% |
| 4wxaA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.51 | 36.0 | 3.37e-01 | 75.8% | 59.5% |
| 4qrlA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 39.0 | 3.31e-01 | 83.3% | 92.7% |
| 1pj5A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.50 | 43.0 | 3.14e-01 | 95.5% | 73.6% |
| 1w63Q00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 35.0 | 2.78e-01 | 74.2% | 50.7% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5049349 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.68 | 49.0 | 3.70e-01 | 75.8% | 56.1% |
| 5010023 | 223.2.1.60 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF2173 | 0.68 | 48.0 | 4.06e-01 | 74.2% | 76.4% |
| 3228484 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.68 | 58.0 | 3.95e-01 | 98.5% | 29.8% |
| 3529135 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.68 | 48.0 | 2.85e-01 | 74.2% | 90.9% |
| 3227180 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.66 | 57.0 | 3.92e-01 | 98.5% | 31.5% |
| 3215907 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 58.0 | 3.86e-01 | 100.0% | 27.8% |
| 3222457 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.66 | 55.0 | 3.86e-01 | 95.5% | 30.7% |
| 5037187 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.65 | 48.0 | 4.24e-01 | 77.3% | 96.8% |
| 3495848 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.65 | 46.0 | 2.75e-01 | 74.2% | 98.2% |
| 4969674 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 45.0 | 2.84e-01 | 72.7% | 100.0% |
| 3233005 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.65 | 57.0 | 3.83e-01 | 100.0% | 28.2% |
| 3404226 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 46.0 | 2.98e-01 | 75.8% | 98.1% |
| 3243873 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.64 | 56.0 | 3.73e-01 | 100.0% | 28.0% |
| 6346 | 331.8.1.1 ↗ | a+b two layers › TBP-like › Protein-L-isoaspartyl O-methyltransferase, C-terminal domain › Protein-L-isoaspartyl O-methyltransferase, C-terminal domain › PIMT_C | 0.64 | 46.0 | 3.88e-01 | 74.2% | 51.9% |
| 3535427 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 46.0 | 2.79e-01 | 75.8% | 94.5% |
| 3176337 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 45.0 | 2.82e-01 | 75.8% | 97.1% |
| 5012894 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.63 | 46.0 | 4.47e-01 | 77.3% | 74.7% |
| 3228995 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.63 | 56.0 | 3.26e-01 | 100.0% | 13.8% |
| 3224107 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 45.0 | 2.77e-01 | 75.8% | 98.6% |
| 3222108 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.63 | 56.0 | 3.85e-01 | 100.0% | 39.9% |
| 3236723 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.60 | 51.0 | 3.63e-01 | 100.0% | 31.7% |
| 6707 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.59 | 42.0 | 3.48e-01 | 75.8% | 94.1% |
| 5069183 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 45.0 | 4.08e-01 | 98.5% | 62.2% |
| 5009920 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.58 | 49.0 | 3.18e-01 | 97.0% | 22.9% |
| 4954485 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 51.0 | 4.10e-01 | 100.0% | 96.2% |
| 3592148 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 50.0 | 3.05e-01 | 100.0% | 95.8% |
| 3705308 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.56 | 40.0 | 3.24e-01 | 74.2% | 89.6% |
| 3712908 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.55 | 39.0 | 3.27e-01 | 74.2% | 93.6% |
| 3606549 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.55 | 39.0 | 3.24e-01 | 74.2% | 95.4% |
| 3605262 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 37.0 | 3.11e-01 | 71.2% | 90.9% |
| 3735882 | 5.1.4.352 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF28370 | 0.55 | 49.0 | 2.91e-01 | 100.0% | 100.0% |
| 3697023 | 5.1.4.352 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF28370 | 0.55 | 48.0 | 2.89e-01 | 100.0% | 91.5% |
| 3948079 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.54 | 38.0 | 3.09e-01 | 74.2% | 89.2% |
| 3605590 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.54 | 38.0 | 3.18e-01 | 74.2% | 93.6% |
| 4335957 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.54 | 43.0 | 4.03e-01 | 98.5% | 72.5% |
| 5070547 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 3.88e-01 | 97.0% | 65.6% |
| 4948221 | 331.1.1.29 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Fer4_10 | 0.53 | 47.0 | 4.34e-01 | 98.5% | 83.5% |
| 3608512 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 38.0 | 3.32e-01 | 75.8% | 78.0% |
| 3600529 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 37.0 | 3.18e-01 | 75.8% | 95.2% |
| 3642082 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.52 | 45.0 | 2.97e-01 | 98.5% | 95.4% |
| 4303875 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.51 | 45.0 | 4.11e-01 | 100.0% | 92.2% |
| 4650209 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.51 | 45.0 | 4.00e-01 | 100.0% | 86.3% |
| 4564620 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.51 | 45.0 | 3.78e-01 | 100.0% | 73.9% |
| 4176120 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.51 | 44.0 | 4.14e-01 | 100.0% | 81.2% |
| 3640672 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.51 | 45.0 | 3.53e-01 | 100.0% | 81.8% |
| 4021058 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.51 | 33.0 | 2.95e-01 | 74.2% | 41.9% |
| 4286824 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.51 | 45.0 | 4.07e-01 | 100.0% | 92.2% |
| 4388719 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.51 | 44.0 | 4.04e-01 | 100.0% | 88.9% |
| 4325382 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.51 | 43.0 | 3.70e-01 | 100.0% | 72.2% |
| 4030292 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 45.0 | 3.09e-01 | 98.5% | 49.5% |
| 3175055 | 304.48.1.37 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 | 0.50 | 42.0 | 2.85e-01 | 95.5% | 61.9% |
| 4099392 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.50 | 44.0 | 3.92e-01 | 100.0% | 85.3% |
| 4448833 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.50 | 44.0 | 4.02e-01 | 98.5% | 97.8% |
| 4024820 | 898.1.1.0 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 | 0.50 | 40.0 | 3.25e-01 | 95.5% | 92.0% |
| 4081229 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.50 | 44.0 | 4.01e-01 | 100.0% | 90.0% |
D2
medium
residues 147-229
Domain cluster:
rep: odve25__YP_009133265__Lambdina_fiscellaria_nucleopolyhedrovirus__1642929__D145-222
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05274.17 best | Baculo_E25 | 113.5 | 1.60e-32 | 97.6% | 42.6% |