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odv-e27

Euk-Vir

Hemileuca_sp._nucleopolyhedrovirus

odv-e27__YP_008378228__Hemileuca_sp._nucleopolyhedrovirus__1367203

Identity

Accession:: YP_008378228 ↗
Protein ID:: odv-e27
Kingdom:: euk

Quality

72.4 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Hemileuca_sp._nucleopolyhedrovirus

TaxID: 1367203

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 50-157

PDB

Domain cluster: rep: ODV-E27__YP_009165614__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D55-153

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05314.17 best	Baculo_ODV-E27	173.9	6.00e-51	100.0%	39.4%

D2 medium residues 221-283

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05314.17 best	Baculo_ODV-E27	97.3	1.30e-27	100.0%	22.7%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4g6dB02	6.10.140.1800	Special › Helix non-globular › Helix Hairpins ›	0.68	57.0	5.27e-01	93.7%	75.3%
6wshA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.65	48.0	5.06e-01	92.1%	89.1%
1s8nA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.60	43.0	4.48e-01	76.2%	98.3%
4a17U01	1.10.287.310	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.60	37.0	3.50e-01	96.8%	51.9%
1furB03	1.10.40.30	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain)	0.59	38.0	4.13e-01	92.1%	82.4%
1kblA05	1.20.80.30	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.58	42.0	3.83e-01	79.4%	86.5%
1lkoA01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.54	47.0	3.63e-01	100.0%	80.7%
1h6qA00	2.170.150.10	Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A	0.51	43.0	3.23e-01	96.8%	47.0%
2ex3B02	1.20.1270.230	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › DNA terminal protein Gp3, priming domain	0.51	46.0	4.28e-01	100.0%	97.5%
1txjA00	2.170.150.10	Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A	0.51	43.0	3.30e-01	98.4%	51.0%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4204289	223.2.1.3 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s	0.71	47.0	3.51e-01	87.3%	28.7%
3504408	6132.1.1.1 ↗	alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix_N	0.65	42.0	4.34e-01	96.8%	70.0%
3428082	509.1.1.0 ↗	alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain	0.64	54.0	5.13e-01	92.1%	96.0%
3406651	592.7.1.1 ↗	alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2	0.62	49.0	4.67e-01	87.3%	100.0%
3960463	103.12.1.0 ↗	alpha arrays › RuvA-C › ANTAR domain › ANTAR domain	0.62	46.0	4.70e-01	87.3%	83.3%
3274626	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.61	47.0	2.85e-01	84.1%	57.5%
5061261	4133.1.1.0 ↗	alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like	0.61	45.0	4.49e-01	100.0%	76.6%
3852693	541.1.1.0 ↗	alpha duplicates or obligate multimers › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit	0.58	41.0	4.29e-01	92.1%	85.5%
3936520	6132.1.1.0 ↗	alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain	0.55	39.0	3.96e-01	100.0%	75.4%
3304304	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.50	45.0	3.81e-01	100.0%	80.0%
3596654	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.50	42.0	2.85e-01	98.4%	83.8%