odv-e66

Euk-Vir

Hemileuca_sp._nucleopolyhedrovirus

odv-e66__YP_008378232__Hemileuca_sp._nucleopolyhedrovirus__1367203

Identity

87.5 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Hemileuca_sp._nucleopolyhedrovirus

TaxID: 1367203

View cluster (43 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 57-134

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3vsmA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.98	91.0	5.66e-01	97.4%	21.6%
1j0mA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.74	65.0	4.12e-01	96.2%	25.2%
1mc2A00	1.20.90.10	Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain	0.53	37.0	3.24e-01	73.1%	54.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1005529	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.98	91.0	5.87e-01	97.4%	25.9%
3666511	7512.1.1.0 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase	0.58	40.0	2.81e-01	71.8%	81.2%
3650048	109.1.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C	0.53	40.0	2.86e-01	82.1%	43.6%
4017146	109.4.1.120 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Kinetochor_Ybp2	0.53	46.0	3.03e-01	96.2%	68.2%
3321176	5051.1.1.6 ↗	alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans	0.52	43.0	2.70e-01	91.0%	48.0%
3836575	601.1.1.40 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PGG	0.51	40.0	3.29e-01	84.6%	60.7%

D2 medium residues 135-256

PDB

Domain cluster: rep: ODV-E66__YP_009165734__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D100-138_155-225

D3 medium residues 257-346

PDB

Domain cluster: rep: ODV-e66b__YP_003429368__Artogeia_rapae_granulovirus__362830__D334-361_374-417

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	155.8	2.30e-45	100.0%	20.7%

D4 medium residues 347-408_437-470_603-620

PDB

Domain cluster: rep: ODV-E66B__YP_009666785__Mythimna_unipuncta_nucleopolyhedrovirus__447897__D357-405_423-450_473-503

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	109.0	3.60e-31	57.0%	14.8%
PF04850.20	Baculo_E66	45.0	9.30e-12	38.6%	9.4%

D5 medium residues 409-436_471-602

PDB

Domain cluster: rep: Odv-e66__YP_006607780__Apocheima_cinerarium_nucleopolyhedrovirus__307461__D454-545

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	163.2	1.30e-47	83.1%	30.2%

D6 medium residues 621-690

PDB

Domain cluster: rep: ODV-E66__NP_613227__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D605-665

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	54.3	1.40e-14	100.0%	15.7%