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odv-e66

Euk-Vir

Spodoptera_frugiperda_granulovirus

odv-e66__YP_009121911__Spodoptera_frugiperda_granulovirus__307454

Identity

Accession:
YP_009121911 ↗
Protein ID:
odv-e66
Kingdom:
euk

Quality

87.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Spodoptera_frugiperda_granulovirus

TaxID: 307454

Cluster

View cluster (43 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-236
PDB
Domain cluster: rep: ODV-e66__YP_002854745__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D22-215
D2 medium residues 237-332
PDB
Domain cluster: rep: ODV-e66b__YP_003429368__Artogeia_rapae_granulovirus__362830__D334-361_374-417
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 150.7 8.20e-44 100.0% 22.1%
D3 medium residues 333-444
PDB
Domain cluster: rep: ODV-E66B__YP_010086533__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D304-403
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 175.8 1.90e-51 100.0% 25.6%
D4 medium residues 445-565
PDB
Domain cluster: rep: Odv-e66__YP_006607780__Apocheima_cinerarium_nucleopolyhedrovirus__307461__D454-545
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 144.7 5.40e-42 100.0% 28.3%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vsmA02 2.70.98.100 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 0.91 88.0 7.29e-01 100.0% 68.2%
2q1fA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.78 74.0 5.47e-01 100.0% 50.5%
1rwhA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.77 71.0 5.38e-01 100.0% 55.7%
1x1iA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.74 69.0 5.21e-01 100.0% 58.6%
1cb8A02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.73 67.0 5.22e-01 98.3% 64.2%
2cwrA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.73 47.0 5.18e-01 93.4% 81.4%
2je8B05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 37.0 4.23e-01 92.6% 66.3%
7r2xA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.71 65.0 5.02e-01 100.0% 55.6%
6bs6B01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 43.0 4.78e-01 95.0% 82.6%
3blcA00 2.70.98.90 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 60.0 4.60e-01 100.0% 55.7%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 35.0 4.03e-01 90.9% 68.9%
3fcsA03 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.66 51.0 4.89e-01 94.2% 71.2%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 45.0 4.71e-01 94.2% 82.0%
4lfhD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 33.0 3.82e-01 92.6% 71.8%
6a2bA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 35.0 3.90e-01 92.6% 76.4%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 45.0 4.42e-01 95.9% 74.1%
3h7jA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 43.0 4.49e-01 95.9% 84.5%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.56 38.0 3.87e-01 95.9% 69.7%
2wngA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 31.0 3.56e-01 89.3% 74.7%
4uypA01 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 4.16e-01 96.7% 73.6%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.54 42.0 4.00e-01 81.8% 88.6%
4p0dA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 48.0 4.26e-01 95.9% 71.2%
2wstA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.54 46.0 4.17e-01 96.7% 93.2%
8begA03 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 4.27e-01 91.7% 81.9%
7zqiA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.84e-01 79.3% 90.7%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 32.0 3.72e-01 81.0% 92.3%
2woyA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 4.05e-01 92.6% 84.2%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 28.0 3.22e-01 87.6% 70.5%
4je0B01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 4.09e-01 94.2% 77.0%
3irpX01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 43.0 4.06e-01 94.2% 76.3%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 4.24e-01 84.3% 100.0%
4ofqA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.96e-01 91.7% 82.6%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1005530 12.3.1.11 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Baculo_E66 0.91 87.0 6.64e-01 100.0% 52.6%
2015 12.3.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.74 69.0 5.22e-01 100.0% 63.6%
5080180 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 42.0 5.12e-01 93.4% 93.3%
2163580 12.3.1.22 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.69 63.0 4.83e-01 100.0% 64.6%
3930755 11.1.1.647 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GAE_BBS1 0.67 44.0 4.28e-01 96.7% 60.8%
4447642 11.1.5.127 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF29228 0.67 45.0 4.34e-01 95.0% 59.3%
3573203 11.1.1.463 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_C17orf99 0.66 36.0 3.51e-01 92.6% 47.7%
4221191 11.1.5.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 0.66 46.0 5.04e-01 94.2% 90.5%
3554031 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.65 51.0 4.85e-01 94.2% 71.4%
3335769 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.65 46.0 4.90e-01 95.0% 84.8%
3730493 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 40.0 4.00e-01 96.7% 60.8%
3168132 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 42.0 4.18e-01 95.9% 64.8%
3740389 11.1.5.37 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD 0.63 48.0 4.94e-01 96.7% 84.3%
5000149 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 39.0 3.86e-01 95.9% 59.2%
3470491 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.62 41.0 3.89e-01 95.9% 55.2%
5044862 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 40.0 4.01e-01 95.9% 63.3%
3408311 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 35.0 3.77e-01 95.0% 65.0%
5048998 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 45.0 4.47e-01 97.5% 73.6%
3786268 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 40.0 4.04e-01 96.7% 65.0%
5015803 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 45.0 4.75e-01 95.0% 88.6%
4013354 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.61 56.0 4.11e-01 100.0% 90.6%
3941056 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 40.0 3.96e-01 94.2% 63.1%
3592495 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.60 41.0 4.27e-01 97.5% 74.8%
3187950 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 40.0 4.00e-01 95.0% 66.4%
5045374 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.59 46.0 3.96e-01 93.4% 52.6%
3860289 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.57 49.0 4.57e-01 95.0% 77.4%
3218043 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 37.0 3.85e-01 93.4% 70.4%
3925038 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.56 33.0 3.30e-01 92.6% 53.1%
5022769 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 48.0 4.97e-01 96.7% 100.0%
3883937 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.55 33.0 3.58e-01 92.6% 71.6%
4001868 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 34.0 3.53e-01 97.5% 67.3%
4004318 4182.1.1.3 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.54 37.0 3.79e-01 86.0% 71.7%
4097420 11.1.5.42 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antigen_C 0.52 44.0 4.04e-01 92.6% 83.1%
4873643 11.1.5.48 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Big_8 0.52 44.0 4.12e-01 94.2% 75.3%
3608810 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 3.70e-01 90.9% 84.4%
4941877 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 41.0 4.15e-01 95.0% 86.4%
4954388 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 42.0 3.82e-01 90.9% 77.6%
3873188 11.1.5.64 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PIG-X 0.51 42.0 3.56e-01 95.9% 52.7%
4270390 11.1.5.42 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antigen_C 0.51 43.0 3.90e-01 93.4% 79.4%
3911670 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.51 35.0 3.81e-01 86.8% 86.0%
3588403 5092.1.1.0 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins 0.51 38.0 3.98e-01 95.0% 93.2%
3896291 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.51 33.0 3.69e-01 81.0% 85.3%
D5 medium residues 566-667
PDB
Domain cluster: rep: ODV-E66B__YP_010086533__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D570-654
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 81.0 1.10e-22 95.1% 22.8%