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odv-e66

Euk-Vir

Oxyplax_ochracea_nucleopolyhedrovirus

odv-e66__YP_009666641__Oxyplax_ochracea_nucleopolyhedrovirus__2083176

Identity

Accession:
YP_009666641 ↗
Protein ID:
odv-e66
Kingdom:
euk

Quality

70.1 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Oxyplax_ochracea_nucleopolyhedrovirus

TaxID: 2083176

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 44-233
PDB
Domain cluster: rep: ODV-e66__YP_002854745__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D22-215
D2 medium residues 234-336
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 53.1 3.30e-14 88.3% 19.1%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vsmA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.85 78.0 5.25e-01 100.0% 29.4%
2wcoA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.77 70.0 4.75e-01 100.0% 58.0%
1rw9A01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.77 70.0 4.71e-01 99.0% 56.6%
1eguA02 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.77 70.0 4.71e-01 100.0% 45.7%
1cb8A01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.73 65.0 4.64e-01 100.0% 45.8%
1c9rB03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.66 37.0 4.10e-01 78.6% 69.6%
1w6jA02 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.66 58.0 3.96e-01 99.0% 35.1%
2pn5A09 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.64 55.0 4.07e-01 98.1% 54.0%
1r76A00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.64 55.0 3.77e-01 97.1% 54.7%
1jlcB03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.63 35.0 3.26e-01 78.6% 40.6%
1h54A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.63 55.0 3.84e-01 100.0% 37.6%
3gt5A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.63 55.0 3.76e-01 99.0% 32.2%
1rq5A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.56 49.0 3.22e-01 100.0% 23.8%
1j0mA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.56 49.0 3.44e-01 100.0% 33.8%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 31.0 3.39e-01 72.8% 63.6%
2xzeB00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.55 41.0 3.74e-01 77.7% 60.9%
6axfA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.54 46.0 4.47e-01 96.1% 88.9%
2cwlB01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 47.0 3.51e-01 100.0% 85.2%
3pk0D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 41.0 3.15e-01 90.3% 89.6%
1irjA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 33.0 3.62e-01 100.0% 81.2%
6dnwA01 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.50 39.0 3.71e-01 83.5% 83.7%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1005529 109.2.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N 0.85 78.0 5.49e-01 100.0% 34.8%
4474 109.2.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N 0.77 70.0 4.71e-01 100.0% 46.6%
59252 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.76 69.0 4.63e-01 99.0% 56.9%
4981297 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.67 60.0 4.24e-01 100.0% 74.8%
3496299 109.2.1.19 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › C5-epim_C 0.67 60.0 4.06e-01 100.0% 55.5%
None — 0.66 59.0 3.84e-01 100.0% 27.7%
3345674 109.2.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › SQHop_cyclase_C 0.65 58.0 4.10e-01 100.0% 39.7%
3837417 109.2.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › SQHop_cyclase_C 0.65 57.0 3.74e-01 100.0% 28.1%
None — 0.65 57.0 3.70e-01 99.0% 39.4%
3782890 109.2.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › SQHop_cyclase_C 0.64 57.0 3.75e-01 99.0% 43.4%
3790716 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.63 44.0 4.05e-01 100.0% 53.6%
None — 0.63 55.0 3.70e-01 100.0% 30.8%
3751220 109.2.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › SQHop_cyclase_C 0.62 56.0 3.66e-01 100.0% 29.8%
4352634 109.2.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › SQHop_cyclase_C 0.62 55.0 3.58e-01 100.0% 29.9%
3598963 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.60 52.0 3.31e-01 100.0% 24.1%
3388433 109.2.1.43 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › DUF2891 0.58 52.0 3.64e-01 99.0% 31.2%
3908419 576.1.1.0 ↗ few secondary structure elements › Tetraspanin extracellular domain › Tetraspanin extracellular domain › Tetraspanin extracellular domain 0.57 31.0 3.68e-01 88.3% 81.5%
3601486 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 47.0 2.87e-01 100.0% 13.6%
3286830 7579.1.1.17 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S15 0.54 45.0 3.13e-01 97.1% 70.0%
3503962 4967.1.1.29 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › DUF7047 0.52 30.0 3.26e-01 74.8% 68.8%
D3 medium residues 337-427
PDB
D4 medium residues 428-564
PDB
D5 medium residues 565-662
PDB