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odv-e66_protein
Euk-VirThysanoplusia_orichalcea_nucleopolyhedrovirus
odv-e66_protein__YP_007250454__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850
Identity
- Accession:
- YP_007250454 ↗
- Protein ID:
- odv-e66_protein
- Kingdom:
- euk
Quality
86.5
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Thysanoplusia_orichalcea_nucleopolyhedrovirus
TaxID: 101850
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 60-156
Domain cluster:
rep: odv-e66__YP_008378232__Hemileuca_sp._nucleopolyhedrovirus__1367203__D57-134
D2
medium
residues 157-262
D3
medium
residues 263-336
Domain cluster:
rep: ODV-E66__YP_009330164__Plodia_interpunctella_granulovirus__262175__D296-357
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04850.20 best | Baculo_E66 | 121.5 | 6.00e-35 | 100.0% | 17.1% |
D4
medium
residues 337-410
Domain cluster:
rep: ODV-E66B__YP_010086533__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D304-403
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04850.20 best | Baculo_E66 | 125.3 | 4.10e-36 | 100.0% | 17.1% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vsmA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.99 | 92.0 | 5.62e-01 | 95.9% | 20.5% |
| 1x1iA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.81 | 62.0 | 4.16e-01 | 82.4% | 22.3% |
| 2q1fA03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.80 | 62.0 | 4.13e-01 | 82.4% | 23.8% |
| 1hn0A03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.76 | 58.0 | 3.87e-01 | 82.4% | 21.7% |
| 4lb8A02 | 2.60.40.3900 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 42.0 | 3.49e-01 | 87.8% | 38.7% |
| 2qzuA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 40.0 | 3.88e-01 | 81.1% | 60.0% |
| 2yj6A02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.61 | 33.0 | 3.04e-01 | 81.1% | 40.0% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 33.0 | 3.04e-01 | 81.1% | 41.4% |
| 4azsA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 41.0 | 4.03e-01 | 75.7% | 100.0% |
| 2xn1A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.58 | 46.0 | 3.07e-01 | 87.8% | 86.8% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 38.0 | 2.98e-01 | 79.7% | 34.0% |
| 3amkA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 41.0 | 3.75e-01 | 79.7% | 97.0% |
| 4cvbA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.55 | 40.0 | 2.41e-01 | 78.4% | 96.6% |
| 2htaA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 45.0 | 3.00e-01 | 90.5% | 78.1% |
| 2yfoA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.54 | 39.0 | 2.62e-01 | 77.0% | 98.1% |
| 2fpnA02 | 3.30.360.40 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › YwmB-like | 0.54 | 35.0 | 3.77e-01 | 81.1% | 76.9% |
| 3b77A01 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.52 | 39.0 | 3.57e-01 | 81.1% | 64.0% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 47.0 | 3.68e-01 | 100.0% | 86.3% |
| 4ekjA01 | 2.60.40.1500 | Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 | 0.51 | 41.0 | 3.31e-01 | 89.2% | 97.4% |
| 4ktpB02 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.51 | 41.0 | 3.99e-01 | 90.5% | 80.5% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 37.0 | 2.43e-01 | 82.4% | 55.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1005530 | 12.3.1.11 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Baculo_E66 | 0.98 | 77.0 | 5.06e-01 | 81.1% | 24.3% |
| 5071969 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.73 | 37.0 | 3.39e-01 | 77.0% | 37.9% |
| 3213778 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.66 | 44.0 | 3.11e-01 | 81.1% | 22.2% |
| 3518485 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.63 | 39.0 | 2.89e-01 | 79.7% | 24.1% |
| 3936161 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.60 | 38.0 | 2.72e-01 | 79.7% | 21.9% |
| 3583025 | 295.1.1.24 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Clc-like | 0.59 | 39.0 | 3.83e-01 | 81.1% | 62.5% |
| 3630405 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.58 | 38.0 | 2.72e-01 | 81.1% | 22.7% |
| 3482099 | 5.1.4.237 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_2nd | 0.58 | 32.0 | 2.23e-01 | 77.0% | 16.2% |
| 3491951 | 5.1.4.220 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd | 0.57 | 42.0 | 2.69e-01 | 81.1% | 16.6% |
| 3481353 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 42.0 | 2.68e-01 | 81.1% | 16.8% |
| 3966449 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.56 | 37.0 | 3.03e-01 | 79.7% | 36.4% |
| 1238188 | 5.1.3.154 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 | 0.56 | 32.0 | 3.75e-01 | 77.0% | 87.2% |
| 4137479 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.54 | 40.0 | 3.85e-01 | 79.7% | 83.5% |
| 3181042 | 5.1.4.331 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30861 | 0.53 | 39.0 | 2.38e-01 | 82.4% | 38.9% |
| 3992906 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.53 | 37.0 | 2.59e-01 | 81.1% | 23.5% |
| 3590950 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.52 | 36.0 | 2.81e-01 | 85.1% | 34.2% |
| 4979775 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.52 | 43.0 | 3.06e-01 | 95.9% | 73.1% |
| 3627262 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.52 | 37.0 | 2.60e-01 | 81.1% | 23.8% |
| 4987274 | 325.1.7.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H | 0.50 | 34.0 | 2.81e-01 | 71.6% | 65.3% |
| 4979374 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.50 | 36.0 | 2.98e-01 | 77.0% | 83.6% |
D5
medium
residues 411-598
Domain cluster:
rep: odv-e66b__YP_009112683__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D393-432_447-516_538-651
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04850.20 best | Baculo_E66 | 227.1 | 5.10e-67 | 100.0% | 41.5% |
D6
medium
residues 599-694
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04850.20 best | Baculo_E66 | 46.2 | 4.20e-12 | 99.0% | 22.6% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vsmA03 | 2.60.40.4340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.97 | 93.0 | 9.42e-01 | 97.9% | 100.0% |
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.77 | 41.0 | 5.11e-01 | 97.9% | 83.3% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.72 | 46.0 | 3.60e-01 | 100.0% | 33.5% |
| 1ealA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 41.0 | 3.69e-01 | 97.9% | 47.2% |
| 3amkA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 47.0 | 4.64e-01 | 81.2% | 98.0% |
| 3vm7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 46.0 | 4.58e-01 | 81.2% | 82.7% |
| 1g5aA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 43.0 | 4.81e-01 | 80.2% | 100.0% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 55.0 | 4.60e-01 | 100.0% | 68.0% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 54.0 | 4.75e-01 | 100.0% | 75.5% |
| 2xvlA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.57 | 47.0 | 3.58e-01 | 90.6% | 93.2% |
| 3dxqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 37.0 | 3.98e-01 | 81.2% | 77.1% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 50.0 | 3.60e-01 | 100.0% | 95.9% |
| 3d33A00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 38.0 | 3.90e-01 | 83.3% | 73.4% |
| 4ba0A01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.55 | 49.0 | 3.89e-01 | 100.0% | 96.0% |
| 3obaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 45.0 | 3.20e-01 | 89.6% | 86.7% |
| 2ovsA00 | 2.40.128.380 | Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR | 0.53 | 41.0 | 3.87e-01 | 82.3% | 81.4% |
| 4lmoA00 | 1.10.132.70 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.53 | 38.0 | 2.84e-01 | 75.0% | 66.5% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 46.0 | 3.57e-01 | 100.0% | 83.2% |
| 3g7gH00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 44.0 | 3.77e-01 | 89.6% | 82.9% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 47.0 | 3.70e-01 | 97.9% | 89.8% |
| 1gw5M02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.51 | 36.0 | 3.18e-01 | 72.9% | 58.6% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 45.0 | 3.59e-01 | 95.8% | 91.8% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1005531 | 12.2.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Baculo_E66 | 0.98 | 95.0 | 9.53e-01 | 100.0% | 100.0% |
| 4030652 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.71 | 49.0 | 4.12e-01 | 92.7% | 44.7% |
| 5043213 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.71 | 44.0 | 3.36e-01 | 100.0% | 30.0% |
| 4957570 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.64 | 42.0 | 3.70e-01 | 91.7% | 47.4% |
| 4079675 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.63 | 32.0 | 3.04e-01 | 75.0% | 44.0% |
| 1974 | 12.1.1.7 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amyl_C | 0.62 | 41.0 | 4.87e-01 | 81.2% | 97.0% |
| 4234211 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.62 | 39.0 | 4.18e-01 | 75.0% | 72.9% |
| 3744768 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.60 | 54.0 | 4.99e-01 | 97.9% | 86.7% |
| 3278054 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.58 | 42.0 | 2.95e-01 | 83.3% | 25.8% |
| 3210934 | 77.3.1.7 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF31062 | 0.58 | 45.0 | 4.35e-01 | 89.6% | 73.3% |
| 4991405 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.58 | 53.0 | 3.45e-01 | 100.0% | 26.6% |
| 3875597 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.54 | 48.0 | 3.12e-01 | 94.8% | 23.8% |
| 3056895 | 71.1.1.7 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 | 0.54 | 49.0 | 3.84e-01 | 97.9% | 90.5% |
| 2581407 | 241.14.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C | 0.54 | 32.0 | 3.46e-01 | 97.9% | 70.5% |
| 3928477 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.54 | 49.0 | 3.87e-01 | 100.0% | 84.1% |
| 4009838 | 310.3.1.4 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C | 0.53 | 40.0 | 4.27e-01 | 83.3% | 96.2% |
| 4579430 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.53 | 44.0 | 3.74e-01 | 89.6% | 81.0% |
| 3396774 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.52 | 38.0 | 3.64e-01 | 97.9% | 66.4% |
| 1107912 | 71.1.1.7 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 | 0.52 | 47.0 | 3.70e-01 | 97.9% | 89.8% |
| 5030147 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 39.0 | 3.38e-01 | 80.2% | 73.8% |
| 3289559 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 39.0 | 2.73e-01 | 81.2% | 27.3% |
| 4030467 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.51 | 39.0 | 2.59e-01 | 84.4% | 34.8% |
| 3184809 | 7515.1.1.2 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase | 0.50 | 44.0 | 2.85e-01 | 95.8% | 81.6% |