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odv-e66b

Euk-Vir

Agrotis_segetum_nucleopolyhedrovirus_B

odv-e66b__YP_009112683__Agrotis_segetum_nucleopolyhedrovirus_B__1580580

Identity

Accession:
YP_009112683 ↗
Protein ID:
odv-e66b
Kingdom:
euk

Quality

79.8 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Agrotis_segetum_nucleopolyhedrovirus_B

TaxID: 1580580

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 652-702
PDB
Domain cluster: rep: ODV-E66__NP_613227__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D605-665
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 44.5 1.40e-11 100.0% 11.8%
D2 medium residues 54-243
PDB
Domain cluster: rep: ODV-e66__YP_002854745__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D22-215
D3 medium residues 244-392
PDB
Domain cluster: rep: ODV-E66__YP_009345851__Mythimna_unipuncta_granulovirus_B__2169746__D245-372
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 199.8 1.00e-58 91.3% 31.3%
D4 medium residues 393-432_447-516_538-651
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 209.8 9.20e-62 100.0% 56.5%
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vsmA02 2.70.98.100 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 0.91 65.0 7.05e-01 72.3% 100.0%
2q1fA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.79 62.0 5.72e-01 80.8% 84.1%
1cb8A02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.75 58.0 5.58e-01 78.1% 84.6%
1f1sA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.75 57.0 5.30e-01 78.6% 85.8%
7r2xA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.74 57.0 5.46e-01 79.5% 83.3%
1rwhA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.71 60.0 5.56e-01 87.1% 83.8%
1x1iA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.71 59.0 5.51e-01 86.6% 83.9%
3bgaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.67 51.0 4.77e-01 77.2% 97.4%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.67 53.0 5.08e-01 82.1% 97.7%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 50.0 4.54e-01 77.2% 90.4%
3nreA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 49.0 4.49e-01 77.7% 99.7%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 47.0 4.36e-01 75.0% 94.7%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.64 48.0 4.57e-01 77.2% 91.4%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 47.0 4.24e-01 74.6% 92.3%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 48.0 4.30e-01 75.9% 93.0%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.63 22.0 3.67e-01 79.0% 86.6%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.60 50.0 4.48e-01 87.1% 97.4%
2yfoA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.60 49.0 4.45e-01 87.1% 97.4%
2zxqA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 46.0 4.30e-01 80.8% 100.0%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.59 49.0 4.44e-01 87.1% 91.4%
6f91A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 54.0 5.04e-01 97.3% 88.5%
2xn1A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.59 49.0 4.39e-01 87.1% 97.1%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.56 51.0 4.98e-01 97.3% 93.1%
2rdyA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.53 49.0 4.11e-01 100.0% 77.5%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.53 49.0 3.76e-01 100.0% 80.6%
4ufcA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.52 49.0 4.25e-01 100.0% 77.8%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1005530 12.3.1.11 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Baculo_E66 0.91 71.0 6.79e-01 78.6% 83.0%
2426584 12.3.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.71 60.0 5.54e-01 86.6% 83.6%
4034340 12.3.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.71 59.0 5.59e-01 86.6% 83.4%
2015 12.3.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.70 59.0 5.54e-01 86.6% 83.0%
42398 12.3.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.69 57.0 5.31e-01 86.2% 83.2%
4283763 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.69 51.0 4.73e-01 76.3% 91.9%
5033471 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.68 24.0 3.55e-01 75.0% 68.6%
4073110 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.68 53.0 4.94e-01 79.9% 94.1%
4125417 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.67 52.0 4.87e-01 80.4% 92.0%
4880457 12.3.1.22 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.66 52.0 4.84e-01 81.2% 94.5%
5033778 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.64 24.0 3.37e-01 75.0% 66.4%
5076441 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.63 54.0 5.13e-01 89.3% 94.2%
5048249 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.63 53.0 4.92e-01 88.4% 88.2%
5047323 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.62 51.0 4.89e-01 85.3% 99.6%
5035188 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 23.0 3.11e-01 74.6% 61.9%
1385068 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.61 52.0 4.60e-01 89.3% 91.3%
4957801 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.60 52.0 5.41e-01 97.8% 98.6%
2033770 12.3.1.32 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › SOGP_2nd 0.60 47.0 4.32e-01 79.9% 97.2%
2550761 12.3.1.29 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_3 0.59 46.0 4.28e-01 80.8% 99.0%
5046360 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.59 49.0 4.73e-01 86.2% 93.6%
3733630 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.58 53.0 5.11e-01 97.3% 93.7%
3987265 12.3.1.29 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_3 0.58 45.0 4.17e-01 80.8% 95.1%
4989818 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.57 50.0 5.06e-01 92.4% 95.9%
1498212 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.57 43.0 3.94e-01 77.2% 90.6%
3040855 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.56 43.0 4.20e-01 77.2% 94.1%
4078246 9.4.1.1 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.56 20.0 3.42e-01 79.0% 93.3%
3290350 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.56 45.0 4.77e-01 85.7% 96.4%
3833941 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.56 52.0 3.57e-01 100.0% 42.3%
3502994 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 26.0 3.36e-01 76.3% 75.4%
1031043 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.54 41.0 4.00e-01 77.2% 96.8%
3276491 12.2.1.8 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556 0.54 30.0 3.89e-01 78.1% 95.3%
3988158 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.53 43.0 3.98e-01 85.7% 97.9%