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orf105

Euk-Vir

Sucra_jujuba_nucleopolyhedrovirus

orf105__YP_009186796__Sucra_jujuba_nucleopolyhedrovirus__1563660

Identity

Accession:
YP_009186796 ↗
Protein ID:
orf105
Kingdom:
euk

Quality

73.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Sucra_jujuba_nucleopolyhedrovirus

TaxID: 1563660

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 54-143
PDB
Domain cluster: representative
D2 medium residues 395-447
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.71 58.0 4.26e-01 92.5% 67.3%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.68 57.0 5.02e-01 100.0% 77.6%
7oiyA01 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.66 55.0 3.64e-01 98.1% 33.6%
6pmiF01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.65 55.0 4.90e-01 100.0% 82.5%
5y27A00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.62 43.0 3.56e-01 75.5% 39.8%
3h0dB02 1.10.1200.150 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain 0.59 47.0 4.21e-01 94.3% 70.4%
3oqvA00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.58 41.0 2.76e-01 75.5% 21.8%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 42.0 3.43e-01 96.2% 42.7%
8fbcA01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.55 47.0 2.87e-01 100.0% 17.0%
3ic9A02 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.54 38.0 3.52e-01 75.5% 90.0%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 38.0 2.64e-01 79.2% 22.2%
4hdrB02 3.40.50.10210 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (CobT), large domain 0.53 44.0 2.93e-01 100.0% 92.5%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 37.0 2.65e-01 81.1% 21.6%
4az3A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 44.0 2.85e-01 96.2% 29.3%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 46.0 3.97e-01 100.0% 81.0%
4r30A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 44.0 3.03e-01 100.0% 28.5%
5hwoA00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 42.0 2.55e-01 98.1% 28.7%
2yqzA02 1.10.8.900 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 39.0 3.66e-01 96.2% 66.2%
2abkA02 1.10.1670.10 Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.51 39.0 3.21e-01 84.9% 90.9%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963295 148.1.3.238 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF815 0.82 74.0 7.33e-01 98.1% 94.5%
3966804 148.1.3.238 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF815 0.78 70.0 6.72e-01 100.0% 98.3%
3693575 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.71 62.0 5.45e-01 100.0% 72.5%
3993593 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.67 55.0 5.27e-01 100.0% 83.1%
3509305 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.67 55.0 4.67e-01 98.1% 54.7%
3213555 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.66 53.0 5.00e-01 98.1% 72.9%
3501683 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.66 57.0 5.50e-01 100.0% 88.3%
3924484 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.66 54.0 4.82e-01 96.2% 63.7%
4987757 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.66 45.0 3.59e-01 71.7% 61.5%
4442514 103.1.1.6 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.65 52.0 5.30e-01 100.0% 100.0%
4993602 632.23.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Helical linker domain in nicking endonuclease N.BspD6I › Helical linker domain in nicking endonuclease N.BspD6I 0.64 51.0 4.96e-01 100.0% 90.5%
4934293 4993.1.1.0 ↗ extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit 0.63 43.0 3.77e-01 77.4% 47.5%
4930399 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 42.0 2.98e-01 77.4% 22.4%
3186778 103.11.1.1 ↗ alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N 0.61 49.0 4.93e-01 100.0% 94.5%
4965208 1076.1.1.0 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related 0.61 42.0 2.86e-01 71.7% 21.1%
3927056 603.1.1.1 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.58 46.0 3.06e-01 86.8% 24.3%
4538372 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.56 38.0 3.62e-01 71.7% 61.5%
3673194 3455.1.1.0 ↗ alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors 0.54 42.0 3.17e-01 90.6% 33.6%
4959254 4953.1.1.41 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › DUF6789 0.54 44.0 3.24e-01 94.3% 90.0%
4304742 1.1.5.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.54 38.0 2.70e-01 79.2% 22.2%
3218345 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.53 44.0 2.74e-01 96.2% 42.8%
3272748 148.1.1.4 ↗ alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF 0.52 36.0 2.73e-01 81.1% 28.6%
353472 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.50 41.0 3.25e-01 92.5% 52.2%