←Back to structures
orf133-like_protein
Euk-VirMalacosoma_neustria_nucleopolyhedrovirus
orf133-like_protein__YP_009552161__Malacosoma_neustria_nucleopolyhedrovirus__38012
Identity
- Accession:
- YP_009552161 ↗
- Protein ID:
- orf133-like_protein
- Kingdom:
- euk
Quality
86.8
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Malacosoma_neustria_nucleopolyhedrovirus
TaxID: 38012
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-94
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.67 | 45.0 | 4.31e-01 | 70.6% | 85.1% |
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.64 | 45.0 | 4.18e-01 | 72.9% | 79.2% |
| 4ggnB01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 41.0 | 4.72e-01 | 70.6% | 93.4% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.62 | 35.0 | 3.27e-01 | 96.5% | 43.5% |
| 6yigA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 39.0 | 3.94e-01 | 70.6% | 64.8% |
| 1wlmA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 46.0 | 4.35e-01 | 83.5% | 89.3% |
| 3uo9C01 | 1.10.238.210 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.57 | 41.0 | 4.28e-01 | 77.6% | 85.7% |
| 2r2iA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 39.0 | 3.88e-01 | 76.5% | 86.2% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 27.0 | 3.53e-01 | 71.8% | 100.0% |
| 1m45A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 36.0 | 4.00e-01 | 70.6% | 89.6% |
| 1f0lA02 | 1.10.490.40 | Mainly Alpha › Orthogonal Bundle › Globin-like › Diphtheria toxin, translocation domain | 0.53 | 43.0 | 3.51e-01 | 92.9% | 70.1% |
| 1bjfA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 37.0 | 3.71e-01 | 75.3% | 88.8% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.52 | 32.0 | 3.14e-01 | 100.0% | 54.8% |
| 1rieA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 40.0 | 3.52e-01 | 83.5% | 59.8% |
| 4ijaA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 44.0 | 3.64e-01 | 96.5% | 68.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230106 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.70 | 48.0 | 4.59e-01 | 71.8% | 88.0% |
| 4175828 | 108.2.1.0 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins | 0.68 | 46.0 | 4.40e-01 | 70.6% | 90.0% |
| 3888996 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.67 | 48.0 | 4.62e-01 | 74.1% | 89.5% |
| 3529465 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.66 | 46.0 | 4.31e-01 | 71.8% | 81.9% |
| 3893451 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.65 | 45.0 | 4.19e-01 | 71.8% | 80.0% |
| 3480621 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.64 | 44.0 | 4.31e-01 | 71.8% | 88.4% |
| 3968916 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.63 | 55.0 | 5.22e-01 | 98.8% | 90.5% |
| 3944712 | 101.1.9.40 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N | 0.62 | 48.0 | 4.51e-01 | 83.5% | 89.5% |
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.61 | 47.0 | 4.50e-01 | 82.4% | 90.0% |
| 3396254 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 45.0 | 4.37e-01 | 80.0% | 92.6% |
| 5012960 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.59 | 43.0 | 4.26e-01 | 78.8% | 100.0% |
| 4037678 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.58 | 36.0 | 3.66e-01 | 75.3% | 62.4% |
| 3214527 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 44.0 | 3.90e-01 | 82.4% | 76.0% |
| 4518438 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.56 | 41.0 | 3.11e-01 | 78.8% | 62.7% |
| 3398252 | 601.4.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › NIT | 0.56 | 38.0 | 3.40e-01 | 71.8% | 83.1% |
| 4998593 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.55 | 38.0 | 3.46e-01 | 70.6% | 70.4% |
| 4090810 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.55 | 42.0 | 3.32e-01 | 87.1% | 74.1% |
| 3274272 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.53 | 41.0 | 3.41e-01 | 82.4% | 76.7% |
| 3598824 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.51 | 38.0 | 3.52e-01 | 81.2% | 89.1% |