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orf1b_product

Euk-Vir

Human_astrovirus

orf1b_product__NP_751905__Human_astrovirus__1868658

Identity

Accession:
NP_751905 ↗
Protein ID:
orf1b_product
Kingdom:
euk

Quality

92.0 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Stellavirales› Astroviridae› Human_astrovirus

TaxID: 1868658

Cluster

View cluster (450 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 424-501
PDB
Domain cluster: rep: ORF1b,_partial__YP_005271208__Astrovirus_wild_boar_WBAstV-1_2011_HUN__1137931__D442-513
D2 medium residues 28-87_181-202
PDB
Domain cluster: rep: ORF1b,_partial__YP_005271208__Astrovirus_wild_boar_WBAstV-1_2011_HUN__1137931__D62-104_195-218
D3 medium residues 88-117_227-268_328-423
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009333212__Beihai_astro-like_virus__1922353__D104-144_202-314
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 32.6 5.30e-08 58.3% 22.0%
D4 medium residues 118-180_203-226_269-327
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009336808__Changjiang_astro-like_virus__1922764__D115-160_194-216_235-262_293-352