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orf24
Euk-VirAlcelaphine_gammaherpesvirus_2
orf24__YP_009044407__Alcelaphine_gammaherpesvirus_2__138184
Identity
- Accession:
- YP_009044407 ↗
- Protein ID:
- orf24
- Kingdom:
- euk
Quality
72.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Macavirus›
Alcelaphine_gammaherpesvirus_2
TaxID: 138184
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-155
D2
high
residues 217-343
Domain cluster:
rep: ORF16__NP_733869__Callitrichine_gammaherpesvirus_3__106331__D190-345
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03043.21 best | Herpes_UL87 | 78.6 | 6.00e-22 | 99.2% | 23.5% |
D3
medium
residues 156-212
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6axgA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.76 | 62.0 | 5.35e-01 | 91.2% | 59.6% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.73 | 49.0 | 4.77e-01 | 70.2% | 63.5% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.68 | 48.0 | 5.11e-01 | 75.4% | 86.0% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.66 | 51.0 | 5.07e-01 | 87.7% | 81.4% |
| 4toiA02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 48.0 | 5.12e-01 | 86.0% | 93.8% |
| 5mmjb02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 44.0 | 4.57e-01 | 84.2% | 82.7% |
| 1qycA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.62 | 49.0 | 3.91e-01 | 89.5% | 80.0% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 47.0 | 4.58e-01 | 93.0% | 93.8% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 46.0 | 4.50e-01 | 93.0% | 82.5% |
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 43.0 | 4.30e-01 | 87.7% | 91.8% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.56 | 47.0 | 3.83e-01 | 98.2% | 70.1% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 44.0 | 4.40e-01 | 93.0% | 91.7% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 41.0 | 3.71e-01 | 82.5% | 59.0% |
| 1sqpF00 | 1.10.1090.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain F › Cytochrome b-c1 complex subunit 7 | 0.55 | 42.0 | 3.48e-01 | 93.0% | 44.8% |
| 1eteA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 45.0 | 3.51e-01 | 98.2% | 81.3% |
| 3k1dA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 43.0 | 2.67e-01 | 100.0% | 17.7% |
| 2rfbA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 40.0 | 2.64e-01 | 100.0% | 37.0% |
| 3i6iA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.50 | 39.0 | 3.22e-01 | 89.5% | 79.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3920827 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.73 | 51.0 | 3.24e-01 | 73.7% | 16.5% |
| 3794896 | 109.4.1.546 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ecm29 | 0.68 | 54.0 | 3.22e-01 | 91.2% | 19.6% |
| 3681341 | 650.1.1.8 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › Ovate | 0.66 | 59.0 | 5.67e-01 | 98.2% | 95.4% |
| 5079011 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.65 | 54.0 | 3.87e-01 | 89.5% | 51.2% |
| 3959009 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.64 | 45.0 | 4.40e-01 | 75.4% | 66.2% |
| 3608212 | 2003.1.5.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 | 0.64 | 56.0 | 3.39e-01 | 100.0% | 82.8% |
| 3704304 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.63 | 55.0 | 5.29e-01 | 98.2% | 93.8% |
| 3588719 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.63 | 52.0 | 5.06e-01 | 94.7% | 86.2% |
| 3533358 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.54 | 42.0 | 3.64e-01 | 87.7% | 77.9% |
D4
medium
residues 402-433_502-592
Domain cluster:
rep: ORF24__YP_009042003__Bovine_gammaherpesvirus_6__1504288__D391-422_518-595
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03043.21 best | Herpes_UL87 | 186.4 | 1.20e-54 | 78.9% | 18.9% |
| PF03043.21 | Herpes_UL87 | 36.0 | 4.80e-09 | 27.6% | 6.3% |
D5
medium
residues 635-694