orf29

Euk-Vir

Alcelaphine_gammaherpesvirus_2

orf29__YP_009044411__Alcelaphine_gammaherpesvirus_2__138184

Identity

76.1 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Alcelaphine_gammaherpesvirus_2

TaxID: 138184

View cluster (63 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 213-419

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	35.6	1.10e-08	84.1%	63.7%
PF02500.23	DNA_pack_N	178.8	2.60e-52	47.3%	36.2%
PF02499.23	DNA_pack_C	137.2	1.10e-39	40.6%	23.9%

D2 high residues 443-678

PDB

Domain cluster: rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	311.0	1.60e-92	100.0%	66.4%

D3 medium residues 28-162

PDB

Domain cluster: rep: ORF29A__YP_010084577__Macaca_nemestrina_rhadinovirus_2__123630__D25-83_114-155

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	77.9	1.50e-21	88.9%	42.4%

D4 medium residues 163-212

PDB

Domain cluster: rep: terminase__YP_010087398__Vombatid_gammaherpesvirus_1__2052651__D164-213

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	58.0	1.80e-15	100.0%	18.4%