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orf32

Euk-Vir

Alcelaphine_gammaherpesvirus_2

orf32__YP_009044414__Alcelaphine_gammaherpesvirus_2__138184

Identity

Accession:: YP_009044414 ↗
Protein ID:: orf32
Kingdom:: euk

Quality

74.7 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Alcelaphine_gammaherpesvirus_2

TaxID: 138184

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-129_238-284

PDB

Domain cluster: rep: ORF32__YP_010084395__Retroperitoneal_fibromatosis-associated_herpesvirus__111469__D1-125_229-267

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04559.18 best	Herpes_UL17	97.7	1.10e-27	73.9%	28.3%

D2 high residues 292-472

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL17__YP_009388533__Common_bottlenose_dolphin_gammaherpesvirus_1_strain_Sarasota__2022783__D344-532

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04559.18 best	Herpes_UL17	138.2	5.80e-40	93.4%	32.7%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3h20A01	3.30.1490.240	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain	0.58	23.0	3.66e-01	80.7%	97.0%
3nbxX04	2.40.128.430	Mainly Beta › Beta Barrel › Lipocalin ›	0.56	28.0	3.45e-01	90.6%	75.7%
5ao2B02	3.30.70.2760	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.51	23.0	2.98e-01	91.7%	76.4%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1161117	272.1.1.2 ↗	a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA	0.60	29.0	3.91e-01	100.0%	88.2%
4968206	331.1.1.1 ↗	a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP	0.56	21.0	3.05e-01	84.0%	71.8%
3246591	2492.1.1.8 ↗	a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172	0.56	40.0	3.96e-01	72.9%	98.9%
3263502	331.4.1.9 ↗	a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C	0.55	24.0	3.28e-01	89.0%	77.8%
3199398	331.19.1.3 ↗	a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › CPSF73-100_C	0.55	21.0	3.07e-01	88.4%	76.2%
4668665	331.2.1.8 ↗	a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C	0.54	22.0	3.11e-01	88.4%	74.4%
3407402	331.1.1.1 ↗	a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP	0.54	23.0	3.02e-01	90.6%	68.4%
3806422	247.1.1.38 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C	0.54	23.0	3.16e-01	89.5%	78.8%
3598831	331.1.1.0 ↗	a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like	0.53	23.0	3.02e-01	92.8%	69.0%
3739666	247.1.1.38 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C	0.53	22.0	2.99e-01	89.5%	72.2%
4929392	331.1.1.0 ↗	a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like	0.52	20.0	2.89e-01	82.9%	72.2%
3517889	331.23.1.0 ↗	a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain	0.50	26.0	3.30e-01	95.0%	84.6%
3778614	233.1.1.5 ↗	a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_2	0.50	32.0	3.12e-01	100.0%	56.9%