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orf68
Euk-VirAlcelaphine_gammaherpesvirus_2
orf68__YP_009044452__Alcelaphine_gammaherpesvirus_2__138184
Identity
- Accession:
- YP_009044452 ↗
- Protein ID:
- orf68
- Kingdom:
- euk
Quality
88.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Macavirus›
Alcelaphine_gammaherpesvirus_2
TaxID: 138184
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-179_213-252_275-286_391-413
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009176905__Testudinid_alphaherpesvirus_3__2560801__D32-61_81-232_316-336_452-482
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nlxA00 | 1.20.120.320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Group V grass pollen allergen | 0.52 | 21.0 | 3.14e-01 | 79.8% | 84.6% |
D2
medium
residues 287-390_414-468
Domain cluster:
rep: putative_major_envelope_glycoprotein__YP_009042048__Bovine_gammaherpesvirus_6__1504288__D178-216_344-465
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 69.1 | 5.50e-19 | 67.9% | 20.0% |