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orf7

Euk-Vir

Alcelaphine_gammaherpesvirus_2

orf7__YP_009044394__Alcelaphine_gammaherpesvirus_2__138184

Identity

Accession:: YP_009044394 ↗
Protein ID:: orf7
Kingdom:: euk

Quality

80.0 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Alcelaphine_gammaherpesvirus_2

TaxID: 138184

Cluster

View cluster (77 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-118

PDB

Domain cluster: rep: transport_protein__YP_004207847__Cricetid_gammaherpesvirus_2__1605972__D1-97

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	101.0	7.20e-29	99.2%	18.8%

D2 medium residues 487-510_617-681

PDB

Domain cluster: rep: terminase_subunit_2__YP_009179297__Elephant_endotheliotropic_herpesvirus_4__548914__D513-536_648-697

D3 medium residues 511-616

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	127.8	5.50e-37	82.1%	13.4%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1u7kA00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.58	36.0	3.42e-01	97.2%	51.1%
8e83B01	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.56	48.0	3.30e-01	99.1%	74.4%
2xgvA00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.55	35.0	3.30e-01	99.1%	51.1%
4x28A01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.55	33.0	3.29e-01	76.4%	55.8%
5l92A00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.54	48.0	3.30e-01	100.0%	61.4%
3errA01	1.20.920.60	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A ›	0.52	45.0	3.61e-01	94.3%	63.0%
4ntwC00	1.20.90.10	Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain	0.52	39.0	3.82e-01	98.1%	72.9%
1u6zA03	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.51	44.0	4.00e-01	97.2%	84.2%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3575635	4044.1.1.0 ↗	alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins	0.61	36.0	3.91e-01	100.0%	70.0%
3404033	592.1.1.1 ↗	alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI	0.60	44.0	4.42e-01	98.1%	76.2%
3582662	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.55	33.0	3.41e-01	96.2%	61.9%
4372101	7014.1.1.1 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA	0.54	42.0	3.99e-01	97.2%	70.4%
3869337	150.3.1.1 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Hormone_1	0.53	45.0	3.55e-01	91.5%	82.7%
3617266	632.1.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain	0.53	33.0	3.19e-01	98.1%	55.8%
3865201	150.3.1.1 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Hormone_1	0.53	45.0	3.55e-01	91.5%	79.5%
3848778	4120.1.1.80 ↗	few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › PF28523, PF30984	0.52	34.0	3.28e-01	99.1%	58.3%