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origin_of_replication-binding_protein

Euk-Vir

Noumeavirus

origin_of_replication-binding_protein__YP_009345590__Noumeavirus__1955558

Identity

Accession:
YP_009345590 ↗
Protein ID:
origin_of_replication-binding_protein
Kingdom:
euk

Quality

77.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Noumeavirus

TaxID: 1955558

Cluster

View cluster (17 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 366-447
PDB
Domain cluster: rep: origin_of_replication-binding_protein__YP_009345580__Noumeavirus__1955558__D365-435
D2 high residues 483-628
PDB
Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02399.22 best Herpes_ori_bp 55.0 6.10e-15 97.3% 18.3%
D3 medium residues 10-98
PDB
D4 medium residues 99-190_290-327
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jsxA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.53 25.0 3.18e-01 73.1% 74.6%
1t3yA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.52 41.0 4.18e-01 86.2% 93.9%
2kcuA00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.52 39.0 3.59e-01 78.5% 84.3%
4bpuC00 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.51 45.0 3.30e-01 96.9% 78.7%
1hqz800 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.51 43.0 4.32e-01 91.5% 97.7%
3lurA00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.51 40.0 3.78e-01 83.8% 93.0%
3iylW01 3.90.1810.10 Alpha Beta › Alpha-Beta Complex › Reovirus components fold › Reovirus components 0.50 39.0 2.91e-01 86.2% 82.7%
5xbtA01 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.50 39.0 3.74e-01 80.8% 94.6%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3492512 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.71 65.0 4.73e-01 96.2% 91.9%
3937694 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.70 64.0 4.91e-01 95.4% 93.2%
3719042 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.66 60.0 4.85e-01 95.4% 97.0%
3608399 862.1.1.7 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › PPL5 0.66 60.0 4.81e-01 95.4% 94.9%
3610883 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.63 55.0 3.99e-01 92.3% 100.0%
3717098 862.1.1.7 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › PPL5 0.62 57.0 4.32e-01 97.7% 96.9%
3296461 390.1.1.6 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 0.60 32.0 3.87e-01 90.8% 77.6%
3324097 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.60 34.0 4.05e-01 96.2% 82.4%
3214270 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.60 34.0 3.58e-01 96.9% 60.0%
3780570 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.58 31.0 3.69e-01 70.0% 76.5%
3381422 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.58 31.0 3.85e-01 96.2% 83.7%
3368215 390.1.1.6 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 0.58 32.0 3.87e-01 96.2% 85.0%
3501995 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.57 31.0 3.71e-01 100.0% 78.8%
3900183 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.56 31.0 3.62e-01 100.0% 75.6%
3473159 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.56 29.0 3.64e-01 93.1% 84.0%
3216877 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.54 31.0 3.65e-01 96.2% 84.7%
4088845 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.53 40.0 2.90e-01 79.2% 97.4%
3479172 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.52 28.0 3.41e-01 72.3% 80.0%
3274559 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.52 28.0 3.46e-01 74.6% 83.7%
3178520 1.1.1.27 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.50 41.0 2.92e-01 88.5% 98.3%
D5 medium residues 218-251_266-281_328-352
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6tmfM00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.53 36.0 3.34e-01 72.0% 80.4%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 3.64e-01 82.7% 87.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4146398 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.57 29.0 2.28e-01 74.7% 20.6%
5075144 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.54 34.0 3.50e-01 86.7% 64.0%
D6 medium residues 634-648_760-849
PDB
Domain cluster: rep: putative_helicase__YP_004346969__Lausannevirus__999883__D772-855
D7 medium residues 649-759
PDB
Domain cluster: rep: DNA_replication_origin-binding_helicase__YP_009010995__Chimpanzee_herpesvirus_strain_105640__332937__D268-285_303-382_532-556
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02399.22 best Herpes_ori_bp 33.2 2.30e-08 93.7% 9.5%
D8 medium residues 1000-1022_1037-1074
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wa0A01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.71 59.0 4.99e-01 100.0% 55.4%
3u1kB04 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.67 47.0 4.49e-01 100.0% 63.9%
1ka8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.41e-01 91.8% 72.0%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.64 47.0 4.52e-01 95.1% 70.4%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 4.79e-01 98.4% 72.5%
1itpA00 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.62 43.0 4.02e-01 96.7% 57.1%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 42.0 3.78e-01 95.1% 50.0%
2zbiA02 3.30.70.2120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 51.0 4.31e-01 96.7% 67.0%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.96e-01 96.7% 52.0%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.59 40.0 3.69e-01 95.1% 53.8%
1yz7A02 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.58 46.0 4.08e-01 98.4% 60.0%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 3.74e-01 96.7% 48.2%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.20e-01 93.4% 70.4%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.57 40.0 3.67e-01 95.1% 55.3%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.35e-01 100.0% 70.2%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 37.0 3.51e-01 95.1% 54.7%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.56 45.0 3.56e-01 100.0% 41.2%
4ne4A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 49.0 3.62e-01 100.0% 65.9%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 37.0 3.41e-01 95.1% 49.4%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.56 38.0 3.75e-01 100.0% 63.4%
3f1yA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 39.0 2.46e-01 73.8% 17.6%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.81e-01 98.4% 60.5%
1zcdA00 1.20.1530.10 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain 0.54 41.0 2.53e-01 82.0% 14.1%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.27e-01 88.5% 40.8%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.65e-01 96.7% 51.4%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.54 38.0 2.92e-01 96.7% 28.7%
4af3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 3.73e-01 93.4% 60.2%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.95e-01 93.4% 79.7%
3ntvA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 41.0 2.98e-01 90.2% 85.2%
1dp7P00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.99e-01 93.4% 76.3%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.74e-01 96.7% 70.4%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.53 43.0 3.23e-01 95.1% 45.6%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 45.0 3.35e-01 98.4% 96.4%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.51e-01 95.1% 57.6%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.45e-01 96.7% 53.0%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.53e-01 98.4% 51.8%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.85e-01 96.7% 71.4%
3ecqA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 43.0 2.90e-01 100.0% 35.6%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 43.0 3.14e-01 98.4% 85.9%
7ahbB01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.51 32.0 3.28e-01 95.1% 64.4%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.50e-01 96.7% 58.2%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 40.0 4.09e-01 95.1% 98.2%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 37.0 3.47e-01 93.4% 64.1%
3dlcA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 41.0 2.97e-01 100.0% 47.5%
4bxiA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.50 40.0 3.19e-01 100.0% 39.7%
2vd5B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 38.0 2.83e-01 95.1% 28.9%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3567088 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.53e-01 98.4% 73.3%
3268629 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.83e-01 95.1% 84.3%
4028119 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 56.0 5.37e-01 98.4% 77.1%
5077304 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.70 51.0 4.81e-01 96.7% 64.0%
5078195 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 5.43e-01 98.4% 86.7%
3508538 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.64 46.0 4.33e-01 100.0% 60.0%
3588037 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 49.0 4.11e-01 95.1% 47.3%
3290652 306.2.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor 0.64 45.0 4.00e-01 95.1% 51.1%
4978789 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 56.0 4.84e-01 100.0% 68.4%
3529971 327.11.2.18 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.63 48.0 4.43e-01 100.0% 63.7%
3877590 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.62 47.0 4.44e-01 100.0% 68.0%
4949570 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.61 53.0 3.83e-01 100.0% 39.5%
3589189 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 3.66e-01 95.1% 40.8%
3306726 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.45e-01 96.7% 68.8%
5081315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 48.0 4.57e-01 93.4% 78.7%
4993815 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 40.0 3.64e-01 95.1% 50.6%
3885545 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 44.0 4.36e-01 96.7% 76.9%
4933731 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.58 44.0 2.68e-01 85.2% 30.9%
3598643 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 45.0 4.34e-01 98.4% 75.7%
4989946 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.57 41.0 3.45e-01 77.0% 44.5%
4928075 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 4.27e-01 96.7% 68.8%
5078487 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 3.78e-01 95.1% 60.0%
3177239 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.57 46.0 3.64e-01 93.4% 43.7%
4946426 3241.1.1.0 ↗ alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 0.56 48.0 3.32e-01 98.4% 53.0%
5048761 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 44.0 4.29e-01 100.0% 77.1%
4033445 7523.1.1.17 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC 0.56 48.0 3.44e-01 100.0% 30.9%
4975584 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.55 40.0 3.94e-01 95.1% 72.9%
4950221 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.55 42.0 3.62e-01 96.7% 50.0%
3268586 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.53 41.0 3.58e-01 96.7% 53.0%
4957834 101.1.2.920 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.53 44.0 3.69e-01 100.0% 52.5%
5048236 314.1.1.3 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.53 39.0 2.50e-01 93.4% 13.8%
4012878 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 41.0 3.53e-01 93.4% 50.4%
4980073 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.89e-01 95.1% 80.0%
4593646 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.62e-01 93.4% 60.0%
5012611 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.52 37.0 3.35e-01 95.1% 50.0%
4929958 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 42.0 3.51e-01 100.0% 49.6%
1146763 101.1.2.72 ↗ alpha arrays › HTH › HTH › winged helix domain › Sulfolobus_pRN 0.52 41.0 3.85e-01 96.7% 71.4%
4983310 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 39.0 3.54e-01 95.1% 56.0%
3483777 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.95e-01 100.0% 76.0%
4945774 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.75e-01 100.0% 60.0%
4999532 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 42.0 2.95e-01 98.4% 28.5%
5028480 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.67e-01 98.4% 67.5%
5010592 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.51 37.0 3.19e-01 93.4% 43.3%
5074767 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 36.0 3.65e-01 95.1% 78.5%
3501315 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.50 38.0 3.35e-01 95.1% 53.0%
5079768 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 40.0 3.72e-01 98.4% 69.0%