outer_shell_protein

Euk-Vir

Baboon_orthoreovirus

outer_shell_protein__YP_004769551__Baboon_orthoreovirus__75888

Identity

73.9 mean pLDDT

Orthornavirae› Duplornaviricota› Resentoviricetes› Reovirales› Spinareoviridae› Orthoreovirus› Baboon_orthoreovirus

TaxID: 75888

View cluster (11 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-176

PDB

Domain cluster: rep: VP5__YP_009507752__Scophthalmus_maximus_reovirus__994485__D39-157

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05993.18 best	Reovirus_M2	43.9	1.40e-11	100.0%	16.4%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1jmuB01	3.90.1370.10	Alpha Beta › Alpha-Beta Complex › Protein mu-1, chain B, domain 1 › Protein mu-1, chain B, domain 1	0.93	73.0	7.85e-01	96.4%	93.3%
2qsfA04	3.30.70.2460	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Rad4, beta-hairpin domain BHD3	0.50	24.0	3.16e-01	92.8%	85.7%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1281363	4063.1.1.0 ↗	a+b complex topology › a+b domain in membrane penetration protein mu1 › a+b domain in membrane penetration protein mu1 › a+b domain in membrane penetration protein mu1	0.85	67.0	5.45e-01	99.3%	46.9%
2794423	4063.1.1.1 ↗	a+b complex topology › a+b domain in membrane penetration protein mu1 › a+b domain in membrane penetration protein mu1 › a+b domain in membrane penetration protein mu1 › Reovirus_M2	0.85	78.0	6.37e-01	96.4%	58.3%

D2 high residues 317-499

PDB

Domain cluster: rep: VP5__YP_009351853__Fall_chinook_aquareovirus__1963254__D287-475

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05993.18 best	Reovirus_M2	37.5	1.20e-09	100.0%	27.7%

D3 medium residues 177-280

PDB

D4 medium residues 281-316_500-676

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05993.18 best	Reovirus_M2	92.0	4.00e-26	82.6%	26.7%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1jmuB03	1.10.2050.10	Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3	0.94	65.0	7.60e-01	82.6%	94.9%
3iylB02	1.10.2050.10	Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3	0.89	50.0	6.44e-01	82.2%	89.6%
4a4kA01	1.20.1500.20	Mainly Alpha › Up-down Bundle › YheA-like fold ›	0.63	23.0	3.18e-01	85.0%	61.9%
3kyiA00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.61	31.0	3.94e-01	83.1%	78.9%
3l8rA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.54	27.0	3.62e-01	95.3%	94.1%
4mndA02	1.20.120.1760	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain	0.53	31.0	3.25e-01	82.6%	61.3%
3m0fB02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.52	25.0	3.19e-01	94.8%	76.4%
1j8yF01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.51	22.0	3.42e-01	92.5%	100.0%
2j6lA01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.50	36.0	3.25e-01	74.2%	63.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3762588	601.1.1.1 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin	0.57	34.0	3.60e-01	82.6%	64.2%
4030228	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.55	30.0	2.81e-01	83.6%	41.0%
3634278	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.55	31.0	3.01e-01	83.6%	48.9%
3179160	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.51	30.0	3.10e-01	83.1%	59.0%