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outer_shell_protein
Euk-VirPiscine_orthoreovirus
outer_shell_protein__YP_009445955__Piscine_orthoreovirus__1157337
Identity
- Accession:
- YP_009445955 ↗
- Protein ID:
- outer_shell_protein
- Kingdom:
- euk
Quality
64.2
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Spinareoviridae›
Orthoreovirus›
Piscine_orthoreovirus
TaxID: 1157337
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 55-233
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05993.18 best | Reovirus_M2 | 65.2 | 4.90e-18 | 99.4% | 26.4% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.52 | 37.0 | 3.91e-01 | 80.4% | 81.4% |
| 2hnlA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 28.0 | 3.52e-01 | 76.0% | 85.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2794423 | 4063.1.1.1 ↗ | a+b complex topology › a+b domain in membrane penetration protein mu1 › a+b domain in membrane penetration protein mu1 › a+b domain in membrane penetration protein mu1 › Reovirus_M2 | 0.85 | 81.0 | 7.29e-01 | 100.0% | 88.1% |
| 1281363 | 4063.1.1.0 ↗ | a+b complex topology › a+b domain in membrane penetration protein mu1 › a+b domain in membrane penetration protein mu1 › a+b domain in membrane penetration protein mu1 | 0.81 | 76.0 | 6.77e-01 | 100.0% | 73.9% |
| 3592678 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 31.0 | 2.90e-01 | 79.9% | 48.8% |
D2
medium
residues 322-373_432-482
D3
medium
residues 545-627