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oxoc49
Euk-VirOxyplax_ochracea_nucleopolyhedrovirus
oxoc49__YP_009666577__Oxyplax_ochracea_nucleopolyhedrovirus__2083176
Identity
- Accession:
- YP_009666577 ↗
- Protein ID:
- oxoc49
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Taxonomy
TaxID: 2083176
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-102
D2
medium
residues 103-194
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hiyA02 | 3.30.70.1260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › bacterial protein sp0830 like | 0.55 | 41.0 | 4.15e-01 | 94.6% | 78.3% |
| 2zbcA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.51 | 38.0 | 4.13e-01 | 92.4% | 100.0% |
| 3k50A01 | 3.30.750.170 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.51 | 27.0 | 2.63e-01 | 93.5% | 45.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4556132 | 375.1.1.74 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mu-like_Com | 0.60 | 24.0 | 3.63e-01 | 80.4% | 94.3% |
| 3519007 | 304.28.1.17 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sterol-sensing | 0.52 | 44.0 | 2.60e-01 | 97.8% | 47.5% |
| 4972094 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.51 | 38.0 | 3.98e-01 | 92.4% | 87.1% |
| 5046683 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.51 | 38.0 | 3.89e-01 | 92.4% | 84.1% |
| 3669781 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.50 | 44.0 | 2.78e-01 | 100.0% | 18.3% |
| 3317697 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.50 | 44.0 | 2.87e-01 | 100.0% | 21.7% |
D3
medium
residues 199-242
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ui8J02 | 1.10.150.390 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.61 | 39.0 | 3.73e-01 | 75.0% | 51.8% |