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p100K
Euk-VirBottlenose_dolphin_adenovirus_1
p100K__YP_009704134__Bottlenose_dolphin_adenovirus_1__1714377
Identity
- Accession:
- YP_009704134 ↗
- Protein ID:
- p100K
- Kingdom:
- euk
Quality
76.4
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Bottlenose_dolphin_adenovirus_1
TaxID: 1714377
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 518-591
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02438.22 best | Adeno_100 | 42.8 | 3.10e-11 | 100.0% | 11.5% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uxtA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 44.0 | 3.06e-01 | 100.0% | 39.9% |
| 4akrA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.51 | 33.0 | 2.96e-01 | 100.0% | 46.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4996628 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 43.0 | 3.24e-01 | 90.5% | 49.3% |
| 3353195 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 26.0 | 2.95e-01 | 94.6% | 57.4% |
| 4998056 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.50 | 40.0 | 3.31e-01 | 93.2% | 96.1% |
D2
medium
residues 102-116_281-359_414-435_467-512
Domain cluster:
rep: 100K__YP_009325348__Bat_mastadenovirus_G__2015376__D293-384_422-438_476-510
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02438.22 best | Adeno_100 | 77.7 | 8.50e-22 | 56.8% | 13.8% |
| PF02438.22 | Adeno_100 | 25.5 | 5.30e-06 | 37.0% | 10.5% |
D3
medium
residues 117-210_436-466
Domain cluster:
rep: 100K__YP_009174953__Simian_adenovirus_8__413258__D149-260
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02438.22 best | Adeno_100 | 41.6 | 7.00e-11 | 75.2% | 15.5% |
| PF02438.22 | Adeno_100 | 26.3 | 3.00e-06 | 27.2% | 5.4% |
D4
medium
residues 211-227_240-280_360-413
Domain cluster:
rep: 100K__YP_004782112__Bat_adenovirus_2__696069__D118-133_208-234_249-267_354-380
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02438.22 best | Adeno_100 | 34.9 | 7.40e-09 | 67.9% | 9.8% |