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p10a

Euk-Vir

Grapevine_Cabernet_Sauvignon_reovirus

p10a__YP_009163947__Grapevine_Cabernet_Sauvignon_reovirus__1640277

Identity

Accession:
YP_009163947 ↗
Protein ID:
p10a
Kingdom:
euk

Quality

54.0 mean pLDDT

Taxonomy

Orthornavirae› Duplornaviricota› Resentoviricetes› Reovirales› Grapevine_Cabernet_Sauvignon_reovirus

TaxID: 1640277

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 141-194
PDB
D2 high residues 216-250_252-338
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rhfA00 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.73 25.0 3.21e-01 100.0% 50.0%
3lbxB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 31.0 3.28e-01 97.5% 47.7%
4hhyC01 1.20.142.10 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain 0.62 39.0 3.84e-01 96.7% 58.8%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 31.0 3.50e-01 100.0% 62.8%
3cexA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.61 53.0 4.76e-01 100.0% 69.4%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.60 27.0 3.20e-01 100.0% 58.8%
6yttA01 1.10.8.190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 0.60 40.0 4.38e-01 100.0% 83.0%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.59 33.0 3.93e-01 100.0% 81.7%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.59 30.0 3.38e-01 100.0% 61.2%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.58 33.0 3.55e-01 100.0% 65.0%
2nsfA01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.58 50.0 4.56e-01 98.4% 72.3%
1ad6A00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 39.0 3.41e-01 70.5% 81.1%
3fb2A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 31.0 3.32e-01 100.0% 63.8%
1hciA03 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 29.0 2.97e-01 100.0% 49.2%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.53 33.0 3.61e-01 100.0% 75.8%
3o10C00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.52 45.0 4.41e-01 97.5% 97.8%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.52 40.0 3.40e-01 81.1% 87.5%
8d7hD01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 46.0 4.11e-01 100.0% 93.6%
2pg0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.50 35.0 3.28e-01 79.5% 57.0%
4n21E00 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 30.0 3.04e-01 100.0% 59.5%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3302491 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 33.0 3.32e-01 100.0% 45.6%
3700672 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.68 31.0 3.27e-01 100.0% 46.1%
3299317 604.1.1.96 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Bap31 0.68 33.0 3.29e-01 100.0% 45.6%
3174045 603.1.1.19 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-18_N 0.66 34.0 2.70e-01 100.0% 24.5%
3503333 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 33.0 2.87e-01 100.0% 37.1%
3474890 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.61 33.0 3.35e-01 100.0% 53.3%
167917 620.1.1.6 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 0.61 53.0 4.76e-01 100.0% 69.4%
3288489 620.1.1.6 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 0.60 53.0 4.83e-01 100.0% 72.7%
4091932 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 31.0 3.06e-01 96.7% 47.4%
3178349 310.2.1.35 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › PF28954 0.55 29.0 2.85e-01 100.0% 46.2%
3782040 101.1.22.0 ↗ alpha arrays › HTH › HTH › double HTH 0.54 34.0 3.56e-01 93.4% 66.1%
3309050 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.53 36.0 3.16e-01 96.7% 48.8%
4135359 4946.1.1.1 ↗ alpha bundles › helical domain in YacF-like proteins › helical domain in YacF-like proteins › helical domain in YacF-like proteins › ZapD 0.51 44.0 4.07e-01 96.7% 94.5%
D3 medium residues 25-39_63-133
PDB