←Back to structures
p22
Euk-VirNorovirus_GI
p22__NP_786947__Norovirus_GI__122928
Identity
- Accession:
- NP_786947 ↗
- Protein ID:
- p22
- Kingdom:
- euk
Quality
57.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Caliciviridae›
Norovirus›
Norovirus_GI
TaxID: 122928
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-78
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05416.19 best | Peptidase_C37 | 84.8 | 7.40e-24 | 100.0% | 14.4% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bbzA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.72 | 41.0 | 4.87e-01 | 86.8% | 87.5% |
| 1e88A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.65 | 32.0 | 3.96e-01 | 86.8% | 81.0% |
| 4bdxA00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.65 | 32.0 | 3.16e-01 | 89.5% | 42.2% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.63 | 41.0 | 4.30e-01 | 85.5% | 73.9% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 45.0 | 3.76e-01 | 81.6% | 84.6% |
| 2va0A00 | 3.30.450.160 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 38.0 | 3.48e-01 | 73.7% | 50.5% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 42.0 | 3.53e-01 | 81.6% | 81.2% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.54 | 33.0 | 3.65e-01 | 100.0% | 77.0% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.52 | 36.0 | 3.10e-01 | 72.4% | 95.5% |
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.51 | 38.0 | 3.85e-01 | 81.6% | 86.8% |
| 1h8mA00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.51 | 41.0 | 3.44e-01 | 90.8% | 67.9% |
| 4dcmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 40.0 | 3.20e-01 | 89.5% | 90.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3915471 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.66 | 30.0 | 3.96e-01 | 84.2% | 80.0% |
| 222713 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.65 | 32.0 | 3.98e-01 | 89.5% | 77.8% |
| 1499696 | 12.6.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C | 0.64 | 40.0 | 4.27e-01 | 80.3% | 72.7% |
| 4619476 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.63 | 43.0 | 3.40e-01 | 71.1% | 79.4% |
| 4152365 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.63 | 32.0 | 3.94e-01 | 98.7% | 80.0% |
| 4492624 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 40.0 | 4.53e-01 | 98.7% | 96.4% |
| 3480221 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.59 | 29.0 | 3.18e-01 | 85.5% | 53.8% |
| 4088743 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 38.0 | 4.12e-01 | 100.0% | 88.3% |
| 5004521 | 4317.1.1.0 ↗ | a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like | 0.56 | 38.0 | 4.18e-01 | 72.4% | 93.3% |
| 3227340 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 39.0 | 3.16e-01 | 94.7% | 37.3% |
| 4051669 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.55 | 45.0 | 4.22e-01 | 98.7% | 73.7% |
| 4941675 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.54 | 43.0 | 2.71e-01 | 92.1% | 29.3% |
| 4368436 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.53 | 44.0 | 2.94e-01 | 90.8% | 58.3% |
| 3391019 | 7524.1.1.4 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › DUF1487 | 0.52 | 45.0 | 3.37e-01 | 100.0% | 97.6% |
| 3244677 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.52 | 43.0 | 3.50e-01 | 97.4% | 64.4% |
| 1245465 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.51 | 32.0 | 3.70e-01 | 71.1% | 96.0% |